RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ZNF354CQ86Y25 554 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 HID1Q8IV36 788 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 COL27A1Q8IZC6 1860 aaPredicted RBP14.45□□□□□ -0.1
VARS-228ENST00000495010 EXD3Q8N9H8 876 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 ZSCAN1Q8NBB4 408 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 CCDC74AQ96AQ1 378 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 TMEM74Q96NL1 305 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 EPAS1Q99814 870 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 CPEB1Q9BZB8 566 aaKnown RBP14.45□□□□□ -0.1
VARS-228ENST00000495010 TRIM4Q9C037 500 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 CLPBQ9H078 707 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 PPARGC1AQ9UBK2 798 aaKnown RBP14.45□□□□□ -0.1
VARS-228ENST00000495010 GPR34Q9UPC5 381 aa14.45□□□□□ -0.1
VARS-228ENST00000495010 GTPBP10A4D1E9 387 aaKnown RBP14.44□□□□□ -0.1
VARS-228ENST00000495010 TMEM110-MUSTN1A8MSY1 372 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 FOXN3O00409 490 aaPredicted RBP14.44□□□□□ -0.1
VARS-228ENST00000495010 CASC3O15234 703 aaKnown RBP14.44□□□□□ -0.1
VARS-228ENST00000495010 ITGB2P05107 769 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 RPLP0P05388 317 aaKnown RBP14.44□□□□□ -0.1
VARS-228ENST00000495010 SFTPCP11686 197 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 XPAP23025 273 aaPredicted RBP14.44□□□□□ -0.1
VARS-228ENST00000495010 HTR1BP28222 390 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 CLCN1P35523 988 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 MTIF2P46199 727 aaKnown RBP14.44□□□□□ -0.1
VARS-228ENST00000495010 GABRB2P47870 512 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 CCL7P80098 99 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 TCEA2Q15560 299 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 KLHL40Q2TBA0 621 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 LRRC73Q5JTD7 316 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 MANEAQ5SRI9 462 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 LVRNQ6Q4G3 990 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 ATG14Q6ZNE5 492 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 SDR16C5Q8N3Y7 309 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 OR6C4Q8NGE1 309 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 PCDH19Q8TAB3 1148 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 EXTL1Q92935 676 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 ARHGEF2Q92974 986 aaKnown RBP14.44□□□□□ -0.1
VARS-228ENST00000495010 CFAP57Q96MR6 1250 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 FOXP3Q9BZS1 431 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 ZNF212Q9UDV6 495 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 PISDQ9UG56 409 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 DNAI1Q9UI46 699 aa14.44□□□□□ -0.1
VARS-228ENST00000495010 ATMQ13315 3056 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 RP1P56715 2156 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 FAM170AA1A519 330 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 D6RAR5 112 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 EFSO43281 561 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 RASGRP1O95267 797 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 CD160O95971 181 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 CELA2BP08218 269 aaPredicted RBP14.43□□□□□ -0.1
VARS-228ENST00000495010 LIPCP11150 499 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 HGFP14210 728 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 FLT3P36888 993 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 MAPKAPK2P49137 400 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 PEX5P50542 639 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 HK3P52790 923 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 ATP11AP98196 1134 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 TGIF1Q15583 401 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 KIF26BQ2KJY2 2108 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 LINC00303Q3SY05 128 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 LEKR1Q6ZMV7 388 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 B3GNT8Q7Z7M8 397 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 XYLT1Q86Y38 959 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 KYQ8NBH2 561 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 ATL2Q8NHH9 583 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 TSACCQ96A04 125 aaPredicted RBP14.43□□□□□ -0.1
VARS-228ENST00000495010 GDAP1L1Q96MZ0 367 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 WRAP53Q9BUR4 548 aaKnown RBP14.43□□□□□ -0.1
VARS-228ENST00000495010 EDEM3Q9BZQ6 932 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 MAGEH1Q9H213 219 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 LRRN3Q9H3W5 708 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 RETREG1Q9H6L5 497 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 MBNL1Q9NR56 388 aaKnown RBP14.43□□□□□ -0.1
VARS-228ENST00000495010 OR12D3Q9UGF7 316 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 PNMA8BQ9ULN7 279 aaPredicted RBP14.43□□□□□ -0.1
VARS-228ENST00000495010 PCDHB11Q9Y5F2 797 aa14.43□□□□□ -0.1
VARS-228ENST00000495010 DOCK4Q8N1I0 1966 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 AREL1O15033 823 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 BUB1O43683 1085 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 RAMP2O60895 175 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 IGSF6O95976 241 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 PNMA6AP0CW24 399 aaPredicted RBP14.42□□□□□ -0.1
VARS-228ENST00000495010 RHOQP17081 205 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 RAPGEF1Q13905 1077 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 LRRC14Q15048 493 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 IRF4Q15306 451 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 TPD52L1Q16890 204 aaPredicted RBP14.42□□□□□ -0.1
VARS-228ENST00000495010 ATXN7L2Q5T6C5 722 aaPredicted RBP14.42□□□□□ -0.1
VARS-228ENST00000495010 TAF3Q5VWG9 929 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 ENPP7Q6UWV6 458 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 Q8N9G6 341 aaPredicted RBP14.42□□□□□ -0.1
VARS-228ENST00000495010 TP53I13Q8NBR0 393 aaPredicted RBP14.42□□□□□ -0.1
VARS-228ENST00000495010 NCAPGQ9BPX3 1015 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 KLQ9UEF7 1012 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 RWDD2AQ9UIY3 292 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 RABGEF1Q9UJ41 708 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 ACSL6Q9UKU0 697 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 LOXL2Q9Y4K0 774 aa14.42□□□□□ -0.1
VARS-228ENST00000495010 ZSCAN5CA6NGD5 496 aaPredicted RBP14.41□□□□□ -0.1
VARS-228ENST00000495010 AGRPO00253 132 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms