RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	MMP17	Q9ULZ9	603 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	SCML1	Q9UN30	329 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	NDRG2	Q9UN36	371 aa	Known RBP	13.69	□□□□□ -0.22
APTX-231	ENST00000494973	ACTL7A	Q9Y615	435 aa		13.69	□□□□□ -0.22
APTX-231	ENST00000494973	CKAP5	Q14008	2032 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	EIF3H	O15372	352 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
APTX-231	ENST00000494973	CTIF	O43310	598 aa	Known RBP	13.68	□□□□□ -0.22
APTX-231	ENST00000494973	DCX	O43602	365 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	BNIP3L	O60238	219 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	PMPCB	O75439	489 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	KLF8	O95600	359 aa	Predicted RBP	13.68	□□□□□ -0.22
APTX-231	ENST00000494973	NDST3	O95803	873 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	ADH1B	P00325	375 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	MMP2	P08253	660 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	CHRNB1	P11230	501 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	PRKCH	P24723	683 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	RGR	P47804	291 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	GRIA4	P48058	902 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	TERF1	P54274	439 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	ZBTB16	Q05516	673 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	ERCC6L	Q2NKX8	1250 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	C2orf27A	Q580R0	203 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	C9orf64	Q5T6V5	341 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	FAXC	Q5TGI0	409 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	KDELC1	Q6UW63	502 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	GDPD4	Q6W3E5	623 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	PRUNE1	Q86TP1	453 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	PRPF39	Q86UA1	669 aa	Known RBP	13.68	□□□□□ -0.22
APTX-231	ENST00000494973	ZCCHC9	Q8N567	271 aa	Known RBP	13.68	□□□□□ -0.22
APTX-231	ENST00000494973	IL17RC	Q8NAC3	791 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	OR2T3	Q8NH03	318 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	PRCC	Q92733	491 aa	Predicted RBP	13.68	□□□□□ -0.22
APTX-231	ENST00000494973	EZH1	Q92800	747 aa	Predicted RBP	13.68	□□□□□ -0.22
APTX-231	ENST00000494973	ART4	Q93070	314 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	LRRC39	Q96DD0	335 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	FMO2	Q99518	471 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	MLPH	Q9BV36	600 aa	Predicted RBP	13.68	□□□□□ -0.22
APTX-231	ENST00000494973	MFSD1	Q9H3U5	465 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	POLM	Q9NP87	494 aa	Predicted RBP	13.68	□□□□□ -0.22
APTX-231	ENST00000494973	DYRK4	Q9NR20	520 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	HACD3	Q9P035	362 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	DKK3	Q9UBP4	350 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	RAI2	Q9Y5P3	530 aa		13.68	□□□□□ -0.22
APTX-231	ENST00000494973	PRUNE2	Q8WUY3	3088 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	LOC285095	A0A1B0GVY8	99 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	KRBA1	A5PL33	1030 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	FAM170B	A6NMN3	283 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	HTRA2	O43464	458 aa	Predicted RBP	13.67	□□□□□ -0.22
APTX-231	ENST00000494973	SIN3B	O75182	1162 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	ERLIN1	O75477	346 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	MT-CYB	P00156	380 aa	Predicted RBP	13.67	□□□□□ -0.22
APTX-231	ENST00000494973	CP	P00450	1065 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	TARS	P26639	723 aa	Known RBP	13.67	□□□□□ -0.22
APTX-231	ENST00000494973	RPS9	P46781	194 aa	Known RBP	13.67	□□□□□ -0.22
APTX-231	ENST00000494973	EPHB1	P54762	984 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	PLTP	P55058	493 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	MRPS25	P82663	173 aa	Known RBP	13.67	□□□□□ -0.22
APTX-231	ENST00000494973	PCSK7	Q16549	785 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	HIF1A	Q16665	826 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	TTC31	Q49AM3	519 aa	Predicted RBP	13.67	□□□□□ -0.22
APTX-231	ENST00000494973	ZNF776	Q68DI1	518 aa	Predicted RBP	13.67	□□□□□ -0.22
APTX-231	ENST00000494973	LRRC8B	Q6P9F7	803 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	CENPU	Q71F23	418 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	CCNJL	Q8IV13	435 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	DNAAF3	Q8N9W5	541 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	TXNDC5	Q8NBS9	432 aa	Known RBP	13.67	□□□□□ -0.22
APTX-231	ENST00000494973	SPATA22	Q8NHS9	363 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	RPLP0P6	Q8NHW5	317 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	IFT81	Q8WYA0	676 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	EDA	Q92838	391 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	MRGPRX2	Q96LB1	330 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	NAT9	Q9BTE0	207 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	FICD	Q9BVA6	458 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	SUV39H2	Q9H5I1	410 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	ANKZF1	Q9H8Y5	726 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	LMAN1L	Q9HAT1	526 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	ARNT2	Q9HBZ2	717 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	PRSS16	Q9NQE7	514 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	GRHL1	Q9NZI5	618 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	BFAR	Q9NZS9	450 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	EYS	Q5T1H1	3165 aa		13.67	□□□□□ -0.22
APTX-231	ENST00000494973	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.66	□□□□□ -0.22
APTX-231	ENST00000494973	ESYT3	A0FGR9	886 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	TSPAN11	A1L157	253 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	SHISA7	A6NL88	538 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	STK25	O00506	426 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	ALDH1A2	O94788	518 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	PGLS	O95336	258 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	CHRM1	P11229	460 aa	Predicted RBP	13.66	□□□□□ -0.22
APTX-231	ENST00000494973	HLA-E	P13747	358 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	XPA	P23025	273 aa	Predicted RBP	13.66	□□□□□ -0.22
APTX-231	ENST00000494973	ITGB7	P26010	798 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	ADRA1A	P35348	466 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	NPY2R	P49146	381 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	DGKE	P52429	567 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	PDE1B	Q01064	536 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	TRAF2	Q12933	501 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	CBLB	Q13191	982 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	SLMAP	Q14BN4	828 aa		13.66	□□□□□ -0.22
APTX-231	ENST00000494973	ZNF805	Q5CZA5	627 aa		13.66	□□□□□ -0.22

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