RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 BCL2L1Q07817 233 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 ITKQ08881 620 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 CCDC173Q0VFZ6 552 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 ZBTB17Q13105 803 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 FAM182AQ5T1J6 154 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 TTC7BQ86TV6 843 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 ZC3H18Q86VM9 953 aaKnown RBP13.69□□□□□ -0.22
COL1A1-208ENST00000494334 TRIM58Q8NG06 486 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 IL12RB2Q99665 862 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 ORAI3Q9BRQ5 295 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 POLR1EQ9GZS1 481 aaKnown RBP13.69□□□□□ -0.22
COL1A1-208ENST00000494334 ATP13A3Q9H7F0 1226 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 EBF2Q9HAK2 575 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 NOD2Q9HC29 1040 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 SCUBE2Q9NQ36 999 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 SEMA4GQ9NTN9 838 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 DKK3Q9UBP4 350 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 AMACRQ9UHK6 382 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 EIF2B4Q9UI10 523 aaKnown RBP13.69□□□□□ -0.22
COL1A1-208ENST00000494334 ATP8A1Q9Y2Q0 1164 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 FADS3Q9Y5Q0 445 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 OTOGLQ3ZCN5 2332 aa13.69□□□□□ -0.22
COL1A1-208ENST00000494334 SPAG17Q6Q759 2223 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-208ENST00000494334 A0A1W2PPC4 97 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 TSPAN11A1L157 253 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 PATE3B3GLJ2 98 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 ZSCAN12O43309 604 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 AP1G1O43747 822 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 TJP3O95049 919 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 HLA-DQB2P05538 268 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 SERPINA4P29622 427 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 DPP6P42658 865 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 CCR5P51681 352 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 PRKD1Q15139 912 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-208ENST00000494334 NOMO1Q15155 1222 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 RPS6KA1Q15418 735 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 CSRP2Q16527 193 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 RALGPS1Q5JS13 557 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 CCDC181Q5TID7 509 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 ALG1LQ6GMV1 187 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 NEK5Q6P3R8 708 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 ZSWIM9Q86XI8 627 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 CNTD1Q8N815 330 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 C1orf216Q8TAB5 229 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 ARRDC2Q8TBH0 407 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 TFB1MQ8WVM0 346 aaKnown RBP13.68□□□□□ -0.22
COL1A1-208ENST00000494334 SNX19Q92543 992 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 RAB7BQ96AH8 199 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 ECHDC3Q96DC8 303 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 SEMA3CQ99985 751 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 MIR1-1HGQ9H1L0 117 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 PREBQ9HCU5 417 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 VPS45Q9NRW7 570 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 TRMT1Q9NXH9 659 aaKnown RBP13.68□□□□□ -0.22
COL1A1-208ENST00000494334 PCDHGC4Q9Y5F7 938 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 SLCO1B1Q9Y6L6 691 aa13.68□□□□□ -0.22
COL1A1-208ENST00000494334 ZFHX2Q9C0A1 2572 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-208ENST00000494334 GON4LQ3T8J9 2241 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 AREL1O15033 823 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 SPINT1O43278 529 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 HTRA2O43464 458 aaPredicted RBP13.67□□□□□ -0.22
COL1A1-208ENST00000494334 LATO43561 262 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 RNGTTO60942 597 aaKnown RBP13.67□□□□□ -0.22
COL1A1-208ENST00000494334 NEBLO76041 1014 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 PCDH8O95206 1070 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 ITIH2P19823 946 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 CD27P26842 260 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 MAT2AP31153 395 aaKnown RBP13.67□□□□□ -0.22
COL1A1-208ENST00000494334 HOXD11P31277 338 aaPredicted RBP13.67□□□□□ -0.22
COL1A1-208ENST00000494334 HOXD12P35452 270 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 OTUD4Q01804 1114 aaKnown RBP13.67□□□□□ -0.22
COL1A1-208ENST00000494334 DSC2Q02487 901 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 NIPAL4Q0D2K0 466 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 XRCC4Q13426 336 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 IHHQ14623 411 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 UGP2Q16851 508 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 TEX44Q53QW1 395 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 LRRC73Q5JTD7 316 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 TCEAL6Q6IPX3 200 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 BRAT1Q6PJG6 821 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 TRIM69Q86WT6 500 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.67□□□□□ -0.22
COL1A1-208ENST00000494334 GPR161Q8N6U8 529 aaKnown RBP13.67□□□□□ -0.22
COL1A1-208ENST00000494334 ACTL9Q8TC94 416 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 TCEAL3Q969E4 200 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 TLR10Q9BXR5 811 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 CEP41Q9BYV8 373 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 SEPT10Q9P0V9 454 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 GGT7Q9UJ14 662 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 TPX2Q9ULW0 747 aaKnown RBP13.67□□□□□ -0.22
COL1A1-208ENST00000494334 ZFR2Q9UPR6 939 aaKnown RBP13.67□□□□□ -0.22
COL1A1-208ENST00000494334 ITM2BQ9Y287 266 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 TTLL3Q9Y4R7 772 aa13.67□□□□□ -0.22
COL1A1-208ENST00000494334 A0A1W2PQU0 124 aa13.66□□□□□ -0.22
COL1A1-208ENST00000494334 HACD1B0YJ81 288 aa13.66□□□□□ -0.22
COL1A1-208ENST00000494334 GNSP15586 552 aa13.66□□□□□ -0.22
COL1A1-208ENST00000494334 CES1P23141 567 aa13.66□□□□□ -0.22
COL1A1-208ENST00000494334 PTPN3P26045 913 aa13.66□□□□□ -0.22
COL1A1-208ENST00000494334 IRX4P78413 519 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms