RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 MSL3P1P0C860 447 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 PNMA6AP0CW24 399 aaPredicted RBP8.35□□□□□ -1.07
RIF1-211ENST00000494333 HLA-EP13747 358 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 BPIFB4P59827 614 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 RPS24P62847 133 aaKnown RBP8.35□□□□□ -1.07
RIF1-211ENST00000494333 MVKQ03426 396 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 ZNF33AQ06730 810 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 MAP4K2Q12851 820 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 RAPGEF1Q13905 1077 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 DRAP1Q14919 205 aaPredicted RBP8.35□□□□□ -1.07
RIF1-211ENST00000494333 DCAF6Q58WW2 860 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 TRIM61Q5EBN2 209 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 EFHC1Q5JVL4 640 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 SLC35F1Q5T1Q4 408 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 FOXB2Q5VYV0 432 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 NADSYN1Q6IA69 706 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 OR6B2Q6IFH4 312 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 DPY19L2P1Q6NXN4 242 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 BEND5Q7L4P6 421 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 ADIPOR2Q86V24 386 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 SLC47A2Q86VL8 602 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 TMPRSS6Q8IU80 811 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 CCDC103Q8IW40 242 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 MFN1Q8IWA4 741 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 AHI1Q8N157 1196 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 LILRB2Q8N423 598 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 DDX1Q92499 740 aaKnown RBP8.35□□□□□ -1.07
RIF1-211ENST00000494333 SIPA1Q96FS4 1042 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 NOX5Q96PH1 765 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 GBP4Q96PP9 640 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 CPXM1Q96SM3 734 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 EDEM2Q9BV94 578 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 PDCL3Q9H2J4 239 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 CD93Q9NPY3 652 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 ITM2CQ9NQX7 267 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.35□□□□□ -1.07
RIF1-211ENST00000494333 XPO7Q9UIA9 1087 aaKnown RBP8.35□□□□□ -1.07
RIF1-211ENST00000494333 NFE2L3Q9Y4A8 694 aa8.35□□□□□ -1.07
RIF1-211ENST00000494333 MYO16Q9Y6X6 1858 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 SPTBN4Q9H254 2564 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 ATXN2Q99700 1313 aaKnown RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 SYNJ2BP-COX16A0A087WUM0 186 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 A0A1W2PQC6 194 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 C7orf72A4D263 438 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 CDX4O14627 284 aaPredicted RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 GRAP2O75791 330 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 APOEP02649 317 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 ERBB2P04626 1255 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 ATP5BP06576 529 aaKnown RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 DLDP09622 509 aaKnown RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 ACADMP11310 421 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 PNLIPP16233 465 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 POLR2EP19388 210 aaKnown RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 PRKCHP24723 683 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 EEF1GP26641 437 aaKnown RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 CD6P30203 668 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 CD70P32970 193 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 SNX16P57768 344 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 PITX1P78337 314 aaPredicted RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 CDK17Q00537 523 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 FNDC3BQ53EP0 1204 aaKnown RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 TCP11X2Q5H9J9 407 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 MS4A13Q5J8X5 152 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 KLHDC7AQ5VTJ3 777 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 E4F1Q66K89 784 aaPredicted RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 RAP1GAP2Q684P5 730 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 C11orf57Q6ZUT1 292 aaPredicted RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 KIAA0907Q7Z7F0 614 aaPredicted RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 TAC4Q86UU9 113 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 SLC41A1Q8IVJ1 513 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 CCDC117Q8IWD4 279 aaPredicted RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 FAM71AQ8IYT1 594 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 LGI2Q8N0V4 545 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 DEFB106AQ8N104 65 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 CFAP52Q8N1V2 620 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 CARNMT1Q8N4J0 409 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 ZNF366Q8N895 744 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.34□□□□□ -1.07
RIF1-211ENST00000494333 ZNF557Q8N988 423 aaPredicted RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 HJURPQ8NCD3 748 aaPredicted RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 C1orf131Q8NDD1 294 aaKnown RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 FIBINQ8TAL6 211 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 WFDC5Q8TCV5 224 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 GPT2Q8TD30 523 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 WFIKKN2Q8TEU8 576 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 PRCCQ92733 491 aaPredicted RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 MYEOVQ96EZ4 313 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 BTN2A3PQ96KV6 586 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 PRICKLE1Q96MT3 831 aaPredicted RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 LSM14BQ9BX40 385 aaKnown RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 NUSAP1Q9BXS6 441 aaKnown RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 SYNCQ9H7C4 482 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 PLCB1Q9NQ66 1216 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 TAB2Q9NYJ8 693 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 WSB2Q9NYS7 404 aaPredicted RBP8.34□□□□□ -1.07
RIF1-211ENST00000494333 COX16Q9P0S2 106 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 SLC12A6Q9UHW9 1150 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 PILRBQ9UKJ0 227 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 CEP83Q9Y592 693 aa8.34□□□□□ -1.07
RIF1-211ENST00000494333 ZNF292O60281 2723 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms