RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	UVRAG	Q9P2Y5	699 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	COQ4	Q9Y3A0	265 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	CCDC195	A0A1B0GUA6	201 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	ATP2C2	O75185	946 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	SOAT2	O75908	522 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	ABLIM3	O94929	683 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	SEC24A	O95486	1093 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	GAS8	O95995	478 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	LRG1	P02750	347 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	CYP1A1	P04798	512 aa	Predicted RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	RPS17	P08708	135 aa	Known RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	ARSD	P51689	593 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	RAD23B	P54727	409 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	VCP	P55072	806 aa	Known RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	SEC13	P55735	322 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	ZBTB16	Q05516	673 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	DUSP4	Q13115	394 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	SMAD4	Q13485	552 aa	Known RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	MGAT5B	Q3V5L5	792 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	MDH1B	Q5I0G3	518 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	CDKAL1	Q5VV42	579 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	NET1	Q7Z628	596 aa	Predicted RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	LINC00518	Q8N0U6	118 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	TTC9B	Q8N6N2	239 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	ANKRD42	Q8N9B4	389 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	JPH3	Q8WXH2	748 aa	Predicted RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	SGF29	Q96ES7	293 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	DESI2	Q9BSY9	194 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	BCO2	Q9BYV7	579 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	CRISPLD1	Q9H336	500 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	SLITRK6	Q9H5Y7	841 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	TMLHE	Q9NVH6	421 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	UBA2	Q9UBT2	640 aa	Predicted RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	GMEB2	Q9UKD1	530 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	BAG5	Q9UL15	447 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	POLH	Q9Y253	713 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	SLC27A5	Q9Y2P5	690 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	PPP2R2C	Q9Y2T4	447 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	USP15	Q9Y4E8	981 aa	Predicted RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	YIPF1	Q9Y548	306 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	NME7	Q9Y5B8	376 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	INSL5	Q9Y5Q6	135 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	C2orf16	Q68DN1	1984 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	MYBPHL	A2RUH7	354 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	CHURC1-FNTB	B4DL54	471 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	MBTPS2	O43462	519 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	GATC	O43716	136 aa	Known RBP	11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	IL33	O95760	270 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	IL9	P15248	144 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	PDGFRA	P16234	1089 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	GSTM2	P28161	218 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	VHL	P40337	213 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	NDST1	P52848	882 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	MRPS5	P82675	430 aa	Known RBP	11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	CYP27A1	Q02318	531 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	KCNC4	Q03721	635 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	NCAPH	Q15003	741 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	KRT31	Q15323	416 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	KCNJ8	Q15842	424 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	EXOC3L4	Q17RC7	722 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	GLRX5	Q86SX6	157 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	ADCK1	Q86TW2	530 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	DHX40	Q8IX18	779 aa	Known RBP	11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	PM20D2	Q8IYS1	436 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	CCDC197	Q8NCU1	140 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	SMG7	Q92540	1137 aa	Known RBP	11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	MYLPF	Q96A32	169 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	COL26A1	Q96A83	441 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	WDR24	Q96S15	920 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	OLFM1	Q99784	485 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	CINP	Q9BW66	212 aa	Predicted RBP	11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	ZDHHC7	Q9NXF8	308 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	SH3BGRL2	Q9UJC5	107 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	PTBP2	Q9UKA9	531 aa	Known RBP	11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	CDH9	Q9ULB4	789 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	PCDHB5	Q9Y5E4	795 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	PCDHGA8	Q9Y5G5	932 aa		11.73	□□□□□ -0.53
BRCA1-222	ENST00000493919	EIF4E1B	A6NMX2	242 aa	Known RBP	11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	BTN3A1	O00481	513 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	AREL1	O15033	823 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	VNN2	O95498	520 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	ATP1A3	P13637	1013 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	ITGA2	P17301	1181 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	NR1D1	P20393	614 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	NOS3	P29474	1203 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	ADH7	P40394	386 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	GPD2	P43304	727 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	RHAG	Q02094	409 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	LGALS3BP	Q08380	585 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	TWF1	Q12792	350 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	CUL2	Q13617	745 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	RCN2	Q14257	317 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	FAM209B	Q5JX69	171 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	MIIP	Q5JXC2	388 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	DHRS4L2	Q6PKH6	230 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	CCDC25	Q86WR0	208 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	UNC45B	Q8IWX7	931 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	TCEAL8	Q8IYN2	117 aa		11.72	□□□□□ -0.53
BRCA1-222	ENST00000493919	ELMOD2	Q8IZ81	293 aa		11.72	□□□□□ -0.53

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