RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CALN1Q9BXU9 219 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 SLC17A9Q9BYT1 436 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 SEPT3Q9UH03 358 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 PCOLCE2Q9UKZ9 415 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 ITM2BQ9Y287 266 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 TMEM110-MUSTN1A8MSY1 372 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 NEMP1O14524 444 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 MAFKO60675 156 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 LCA5LO95447 670 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 RENBPP51606 427 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 FGL2Q14314 439 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 ANKRD20A8PQ5CZ79 823 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 SRLQ86TD4 932 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 TTC7BQ86TV6 843 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 SPATS2Q86XZ4 545 aaKnown RBP22.88■■□□□ 1.25
SNIP1-203ENST00000493916 CCDC170Q8IYT3 715 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 FAM174AQ8TBP5 190 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 ASB12Q8WXK4 309 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 PANX2Q96RD6 677 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 C1QTNF2Q9BXJ5 285 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 SUV39H2Q9H5I1 410 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 ATP13A3Q9H7F0 1226 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 KLHL11Q9NVR0 708 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 GGT7Q9UJ14 662 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 CA5BQ9Y2D0 317 aa22.88■■□□□ 1.25
SNIP1-203ENST00000493916 BUB1BO60566 1050 aaPredicted RBP22.87■■□□□ 1.25
SNIP1-203ENST00000493916 TIMP2P16035 220 aa22.87■■□□□ 1.25
SNIP1-203ENST00000493916 HSPA9P38646 679 aaKnown RBP22.87■■□□□ 1.25
SNIP1-203ENST00000493916 SLC10A7Q0GE19 358 aa22.87■■□□□ 1.25
SNIP1-203ENST00000493916 PAFAH1B3Q15102 231 aaKnown RBP22.87■■□□□ 1.25
SNIP1-203ENST00000493916 NCBP2-AS2Q69YL0 99 aa22.87■■□□□ 1.25
SNIP1-203ENST00000493916 BRAT1Q6PJG6 821 aa22.87■■□□□ 1.25
SNIP1-203ENST00000493916 GCNT7Q6ZNI0 430 aa22.87■■□□□ 1.25
SNIP1-203ENST00000493916 ABI3BPQ7Z7G0 1075 aa22.87■■□□□ 1.25
SNIP1-203ENST00000493916 PCDH19Q8TAB3 1148 aa22.87■■□□□ 1.25
SNIP1-203ENST00000493916 BAHD1Q8TBE0 780 aaPredicted RBP22.87■■□□□ 1.25
SNIP1-203ENST00000493916 SETD7Q8WTS6 366 aaKnown RBP22.87■■□□□ 1.25
SNIP1-203ENST00000493916 KLHDC7BQ96G42 594 aa22.87■■□□□ 1.25
SNIP1-203ENST00000493916 LENG8Q96PV6 779 aaPredicted RBP22.87■■□□□ 1.25
SNIP1-203ENST00000493916 MYOCQ99972 504 aa22.87■■□□□ 1.25
SNIP1-203ENST00000493916 FZD3Q9NPG1 666 aa22.87■■□□□ 1.25
SNIP1-203ENST00000493916 SPAARA0A1B0GVQ0 90 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 IGLON5A6NGN9 336 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 ZNF487B1APH4 448 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 MUSKO15146 869 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 MFSD11O43934 449 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 FECHP22830 423 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 SERPINA4P29622 427 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 RXRGP48443 463 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 ARRB1P49407 418 aaPredicted RBP22.86■■□□□ 1.25
SNIP1-203ENST00000493916 AP1S1P61966 158 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 FAM193AP78312 1265 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 SIM1P81133 766 aaPredicted RBP22.86■■□□□ 1.25
SNIP1-203ENST00000493916 GALNT2Q10471 571 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 ZNF235Q14590 738 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 SHBQ15464 509 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 TRIP6Q15654 476 aaKnown RBP22.86■■□□□ 1.25
SNIP1-203ENST00000493916 GLRX5Q86SX6 157 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 VSIG1Q86XK7 387 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 HS3ST3A1Q9Y663 406 aa22.86■■□□□ 1.25
SNIP1-203ENST00000493916 THEGLP0DJG4 465 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 SLC1A1P43005 524 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 GRK6P43250 576 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 MAGEA1P43355 309 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 HADHBP55084 474 aaKnown RBP22.85■■□□□ 1.25
SNIP1-203ENST00000493916 SHC2P98077 582 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 IL9RQ01113 521 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 ELP6Q0PNE2 266 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 SGCGQ13326 291 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 UGP2Q16851 508 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 INAVAQ3KP66 663 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 LRRC73Q5JTD7 316 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 CFAP58Q5T655 872 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 LRRC38Q5VT99 294 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 KYAT3Q6YP21 454 aaKnown RBP22.85■■□□□ 1.25
SNIP1-203ENST00000493916 CAMK1DQ8IU85 385 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 BBS5Q8N3I7 341 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 DENND6BQ8NEG7 585 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 NSMCE1Q8WV22 266 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 ECHDC3Q96DC8 303 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 MGME1Q9BQP7 344 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 PCDHB9Q9Y5E1 797 aa22.85■■□□□ 1.25
SNIP1-203ENST00000493916 A6NNZ2 444 aa22.84■■□□□ 1.25
SNIP1-203ENST00000493916 PAK4O96013 591 aaPredicted RBP22.84■■□□□ 1.25
SNIP1-203ENST00000493916 XPAP23025 273 aaPredicted RBP22.84■■□□□ 1.25
SNIP1-203ENST00000493916 KDELR1P24390 212 aa22.84■■□□□ 1.25
SNIP1-203ENST00000493916 EPHA8P29322 1005 aaPredicted RBP22.84■■□□□ 1.25
SNIP1-203ENST00000493916 CYLC1P35663 651 aaPredicted RBP22.84■■□□□ 1.25
SNIP1-203ENST00000493916 GARSP41250 739 aaKnown RBP22.84■■□□□ 1.25
SNIP1-203ENST00000493916 BCL2L1Q07817 233 aa22.84■■□□□ 1.25
SNIP1-203ENST00000493916 TMEM52BQ4KMG9 183 aa22.84■■□□□ 1.25
SNIP1-203ENST00000493916 PRAMEF14Q5SWL7 426 aa22.84■■□□□ 1.25
SNIP1-203ENST00000493916 PQLC3Q8N755 202 aa22.84■■□□□ 1.25
SNIP1-203ENST00000493916 OR13H1Q8NG92 308 aa22.84■■□□□ 1.25
SNIP1-203ENST00000493916 CXorf40AQ8TE69 158 aa22.84■■□□□ 1.25
SNIP1-203ENST00000493916 SAP25Q8TEE9 199 aa22.84■■□□□ 1.25
SNIP1-203ENST00000493916 RAPGEF5Q92565 580 aa22.84■■□□□ 1.25
SNIP1-203ENST00000493916 KLF6Q99612 283 aaPredicted RBP22.84■■□□□ 1.25
SNIP1-203ENST00000493916 CDC6Q99741 560 aa22.84■■□□□ 1.25
SNIP1-203ENST00000493916 ANP32EQ9BTT0 268 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms