RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 MMP10P09238 476 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 GNAO1P09471 354 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 TMEM253P0C7T8 217 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 ATP2B4P23634 1241 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 MAN1A1P33908 653 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 SHMT1P34896 483 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 SLC18A1P54219 525 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 ERVFC1P60507 584 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 CCNA1P78396 465 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 CCNG2Q16589 344 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 FRMD7Q6ZUT3 714 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 EFL1Q7Z2Z2 1120 aaKnown RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 CARM1Q86X55 608 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 PLD3Q8IV08 490 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 MAPKAPK5Q8IW41 473 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 SCML4Q8N228 414 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 CELF2-AS1Q8N7Q2 184 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 NSUN6Q8TEA1 469 aaKnown RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 NXNL1Q96CM4 212 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 HDAC11Q96DB2 347 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 TTPALQ9BTX7 342 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 MRIQ9BWK5 157 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 TINAGL1Q9GZM7 467 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 ELOVL6Q9H5J4 265 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 COG4Q9H9E3 785 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 IFT46Q9NQC8 304 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 KCNQ5Q9NR82 932 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 ITGA11Q9UKX5 1188 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 CNOT11Q9UKZ1 510 aaKnown RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 BTBD3Q9Y2F9 522 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 IGSF9BQ9UPX0 1349 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 HMX3A6NHT5 357 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 OR6C70A6NIJ9 312 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 USP17L12C9JPN9 530 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 USP17L21D6R901 530 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 TRDMT1O14717 391 aaKnown RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 PPEF1O14829 653 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 HTRA2O43464 458 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 ATG13O75143 517 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 NPM3O75607 178 aaKnown RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 SLITRK5O94991 958 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 USP17L8P0C7I0 530 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 GZMAP12544 262 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 BMP4P12644 408 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 CD40LGP29965 261 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 SOX9P48436 509 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 UBE3AQ05086 875 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 FASTKD3Q14CZ7 662 aaKnown RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 PCBP1Q15365 356 aaKnown RBP eCLIP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 ZNF124Q15973 351 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 GJB7Q6PEY0 223 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 ABRAXAS1Q6UWZ7 409 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 C16orf89Q6UX73 402 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 STXBP4Q6ZWJ1 553 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 IRF2BP2Q7Z5L9 587 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 OR8H3Q8N146 312 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 NLGN1Q8N2Q7 840 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 UBASH3BQ8TF42 649 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 BIRC7Q96CA5 298 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 TEKT5Q96M29 485 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 SAMD11Q96NU1 681 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 TRAF4Q9BUZ4 470 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 APOL5Q9BWW9 433 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 C6orf62Q9GZU0 229 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 STARD7Q9NQZ5 370 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 DPP3Q9NY33 737 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 IL37Q9NZH6 218 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 TRMT6Q9UJA5 497 aaKnown RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 PTBP2Q9UKA9 531 aaKnown RBP6.92□□□□□ -1.3
VPS13B-205ENST00000493587 LRFN2Q9ULH4 789 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 SNX5Q9Y5X3 404 aa6.92□□□□□ -1.3
VPS13B-205ENST00000493587 KAT6AQ92794 2004 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 OR5K3A6NET4 321 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 OLFM2O95897 454 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 GLAP06280 429 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 FCER2P06734 321 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ME2P23368 584 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 GTF2E2P29084 291 aaKnown RBP6.91□□□□□ -1.3
VPS13B-205ENST00000493587 PRKAR1BP31321 381 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 GRM5P41594 1212 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 MAPKAPK2P49137 400 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 KRR1Q13601 381 aaKnown RBP6.91□□□□□ -1.3
VPS13B-205ENST00000493587 TMEM236Q5W0B7 351 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 TYW3Q6IPR3 259 aaKnown RBP6.91□□□□□ -1.3
VPS13B-205ENST00000493587 DPY19L2P1Q6NXN4 242 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 C16orf46Q6P387 395 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 NSMFQ6X4W1 530 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ARHGAP36Q6ZRI8 547 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 SIAH1Q8IUQ4 282 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 MICALL2Q8IY33 904 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ZNF565Q8N9K5 539 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 FAM156AQ8NDB6 213 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 SLC5A5Q92911 643 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 TNIP3Q96KP6 325 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 MRM3Q9HC36 420 aaKnown RBP6.91□□□□□ -1.3
VPS13B-205ENST00000493587 SFMBT1Q9UHJ3 866 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 STOML2Q9UJZ1 356 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 AURKCQ9UQB9 309 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 GNB5O14775 395 aa6.91□□□□□ -1.3
VPS13B-205ENST00000493587 ST8SIA5O15466 376 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms