RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 CFAP58Q5T655 872 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 ALG1LQ6GMV1 187 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 LAIR1Q6GTX8 287 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 DARS2Q6PI48 645 aaKnown RBP17.03■□□□□ 0.32
RER1-208ENST00000493207 SLC41A1Q8IVJ1 513 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 HTR3CQ8WXA8 447 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 HSPA12BQ96MM6 686 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 ZNF641Q96N77 438 aaPredicted RBP17.03■□□□□ 0.32
RER1-208ENST00000493207 AGAP3Q96P47 875 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 KCND1Q9NSA2 647 aa17.03■□□□□ 0.32
RER1-208ENST00000493207 FRYLO94915 3013 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 TBC1D3DA0A087WVF3 549 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 TBC1D3IA0A087WXS9 549 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 TBC1D3EA0A087X179 549 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 TBC1D3KA0A087X1G2 549 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.02■□□□□ 0.32
RER1-208ENST00000493207 TBC1D3FA6NER0 549 aaPredicted RBP17.02■□□□□ 0.32
RER1-208ENST00000493207 MEI4A8MW99 385 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 TBC1D3LB9A6J9 549 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 MTSS1O43312 755 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 TBC1D3HP0C7X1 549 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 TAS2R38P59533 333 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 GNG11P61952 73 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 NIPAL4Q0D2K0 466 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 WASHC5Q12768 1159 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 TEX44Q53QW1 395 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 SPDYCQ5MJ68 293 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 TBC1D3GQ6DHY5 549 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 TBC1D3CQ6IPX1 549 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 CDKL3Q8IVW4 592 aaPredicted RBP17.02■□□□□ 0.32
RER1-208ENST00000493207 TBC1D3Q8IZP1 549 aaPredicted RBP17.02■□□□□ 0.32
RER1-208ENST00000493207 PAF1Q8N7H5 531 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 CNTD1Q8N815 330 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 CADM4Q8NFZ8 388 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 OR2T34Q8NGX1 318 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 FOXJ1Q92949 421 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 DKK3Q9UBP4 350 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 PCDHGC4Q9Y5F7 938 aa17.02■□□□□ 0.32
RER1-208ENST00000493207 TRAFD1O14545 582 aaPredicted RBP17.01■□□□□ 0.31
RER1-208ENST00000493207 FSBPO95073 299 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 FGGP02679 453 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 CES1P23141 567 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 ABL2P42684 1182 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 LYSMD4Q5XG99 296 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 BRAT1Q6PJG6 821 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 TTC7BQ86TV6 843 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 ZSWIM9Q86XI8 627 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 ARRDC2Q8TBH0 407 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 HCAR2Q8TDS4 363 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 PDCD6IPQ8WUM4 868 aaKnown RBP17.01■□□□□ 0.31
RER1-208ENST00000493207 ATG4AQ8WYN0 398 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 SNX19Q92543 992 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 WDR24Q96S15 920 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 FERMT1Q9BQL6 677 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 KDM4CQ9H3R0 1056 aa17.01■□□□□ 0.31
RER1-208ENST00000493207 ATXN2Q99700 1313 aaKnown RBP17■□□□□ 0.31
RER1-208ENST00000493207 TSPAN11A1L157 253 aa17■□□□□ 0.31
RER1-208ENST00000493207 BCLAF3A2AJT9 711 aaKnown RBP17■□□□□ 0.31
RER1-208ENST00000493207 METTL12A8MUP2 240 aa17■□□□□ 0.31
RER1-208ENST00000493207 KCNN4O15554 427 aa17■□□□□ 0.31
RER1-208ENST00000493207 PLXNA2O75051 1894 aa17■□□□□ 0.31
RER1-208ENST00000493207 SOCS5O75159 536 aa17■□□□□ 0.31
RER1-208ENST00000493207 EPN2O95208 641 aa17■□□□□ 0.31
RER1-208ENST00000493207 SERPINF2P08697 491 aa17■□□□□ 0.31
RER1-208ENST00000493207 TIMP2P16035 220 aa17■□□□□ 0.31
RER1-208ENST00000493207 XPAP23025 273 aaPredicted RBP17■□□□□ 0.31
RER1-208ENST00000493207 ITPKAP23677 461 aa17■□□□□ 0.31
RER1-208ENST00000493207 CD86P42081 329 aa17■□□□□ 0.31
RER1-208ENST00000493207 PPP2CBP62714 309 aa17■□□□□ 0.31
RER1-208ENST00000493207 PPP2CAP67775 309 aa17■□□□□ 0.31
RER1-208ENST00000493207 CREB5Q02930 508 aa17■□□□□ 0.31
RER1-208ENST00000493207 TRAF2Q12933 501 aa17■□□□□ 0.31
RER1-208ENST00000493207 IHHQ14623 411 aa17■□□□□ 0.31
RER1-208ENST00000493207 LONRF2Q1L5Z9 754 aa17■□□□□ 0.31
RER1-208ENST00000493207 KIAA0895LQ68EN5 471 aa17■□□□□ 0.31
RER1-208ENST00000493207 CYP2U1Q7Z449 544 aa17■□□□□ 0.31
RER1-208ENST00000493207 ZNF567Q8N184 647 aa17■□□□□ 0.31
RER1-208ENST00000493207 C1orf54Q8WWF1 131 aa17■□□□□ 0.31
RER1-208ENST00000493207 RAB7BQ96AH8 199 aa17■□□□□ 0.31
RER1-208ENST00000493207 ECHDC3Q96DC8 303 aa17■□□□□ 0.31
RER1-208ENST00000493207 LOXL4Q96JB6 756 aa17■□□□□ 0.31
RER1-208ENST00000493207 PBKQ96KB5 322 aa17■□□□□ 0.31
RER1-208ENST00000493207 TEKT5Q96M29 485 aa17■□□□□ 0.31
RER1-208ENST00000493207 OSBPL9Q96SU4 736 aa17■□□□□ 0.31
RER1-208ENST00000493207 RBM15Q96T37 977 aaKnown RBP eCLIP17■□□□□ 0.313e-7■■□□□ 13.6
RER1-208ENST00000493207 VAT1Q99536 393 aa17■□□□□ 0.31
RER1-208ENST00000493207 PCED1AQ9H1Q7 454 aa17■□□□□ 0.31
RER1-208ENST00000493207 GLOD4Q9HC38 313 aa17■□□□□ 0.31
RER1-208ENST00000493207 PREBQ9HCU5 417 aa17■□□□□ 0.31
RER1-208ENST00000493207 KLHL8Q9P2G9 620 aaPredicted RBP17■□□□□ 0.31
RER1-208ENST00000493207 GGT7Q9UJ14 662 aa17■□□□□ 0.31
RER1-208ENST00000493207 GMEB2Q9UKD1 530 aa17■□□□□ 0.31
RER1-208ENST00000493207 DNPEPQ9ULA0 475 aa17■□□□□ 0.31
RER1-208ENST00000493207 ITM2BQ9Y287 266 aa17■□□□□ 0.31
RER1-208ENST00000493207 FADS3Q9Y5Q0 445 aa17■□□□□ 0.31
RER1-208ENST00000493207 UPK3BL1B0FP48 263 aa16.99■□□□□ 0.31
RER1-208ENST00000493207 UPK3BL2E5RIL1 263 aa16.99■□□□□ 0.31
RER1-208ENST00000493207 NEMP1O14524 444 aa16.99■□□□□ 0.31
RER1-208ENST00000493207 HTRA2O43464 458 aaPredicted RBP16.99■□□□□ 0.31
RER1-208ENST00000493207 LIASO43766 372 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms