RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	CFAP58	Q5T655	872 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	MFSD7	Q6UXD7	560 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	SPOCD1	Q6ZMY3	1216 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	PARS2	Q7L3T8	475 aa	Known RBP	13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	ZCCHC9	Q8N567	271 aa	Known RBP	13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	PLD5	Q8N7P1	536 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	LRRC57	Q8N9N7	239 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	C1orf216	Q8TAB5	229 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	UBE2Q2	Q8WVN8	375 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	HDAC11	Q96DB2	347 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	ZDHHC5	Q9C0B5	715 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	BRD8	Q9H0E9	1235 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	CAPN10	Q9HC96	672 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	DTL	Q9NZJ0	730 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	AMACR	Q9UHK6	382 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	DMTF1	Q9Y222	760 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	PCDHA3	Q9Y5H8	950 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	HEY1	Q9Y5J3	304 aa		13.98	□□□□□ -0.17
PTPN7-215	ENST00000492451	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	GRID2IP	A4D2P6	1211 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	PPP1R12A	O14974	1030 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	INSIG1	O15503	277 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	TSPAN6	O43657	245 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	RNGTT	O60942	597 aa	Known RBP	13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	PCDH8	O95206	1070 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	CCDC175	P0C221	793 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	XPA	P23025	273 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	CTNNA2	P26232	953 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	CETN2	P41208	172 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	SCNN1B	P51168	640 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	BCL2L1	Q07817	233 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	PDK1	Q15118	436 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	SETMAR	Q53H47	684 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	KIAA1161	Q6NSJ0	714 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	BRAT1	Q6PJG6	821 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	TTC7B	Q86TV6	843 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	CCDC50	Q8IVM0	306 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	TEX26	Q8N6G2	289 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	CCNY	Q8ND76	341 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	MAML1	Q92585	1016 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	VOPP1	Q96AW1	172 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	SKA1	Q96BD8	255 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	FEM1C	Q96JP0	617 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	NUDCD1	Q96RS6	583 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	EDEM2	Q9BV94	578 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	SUV39H2	Q9H5I1	410 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	TM9SF3	Q9HD45	589 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	FSCN3	Q9NQT6	498 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	AMFR	Q9UKV5	643 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451	FADS3	Q9Y5Q0	445 aa		13.97	□□□□□ -0.17
PTPN7-215	ENST00000492451		A0A1W2PQ67	120 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451		A0A1W2PQU0	124 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	C4orf47	A7E2U8	309 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	MIF4GD	A9UHW6	222 aa	Known RBP	13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	NEMP1	O14524	444 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	ARHGAP33	O14559	1287 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	CDX4	O14627	284 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	NEBL	O76041	1014 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	CCNB1	P14635	433 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	ENG	P17813	658 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	TGM2	P21980	687 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	CES1	P23141	567 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	RGR	P47804	291 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	GRIA4	P48058	902 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	ATXN3	P54252	364 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	RWDD2B	P57060	319 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	PPP2CB	P62714	309 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	POLR2L	P62875	67 aa	Known RBP	13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	DYNLT1	P63172	113 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	RPS21	P63220	83 aa	Known RBP	13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	RACK1	P63244	317 aa	Known RBP	13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	PPP2CA	P67775	309 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	SLC10A2	Q12908	348 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	PPP2R5E	Q16537	467 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	SLC45A4	Q5BKX6	768 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	PEX26	Q7Z412	305 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	NT5DC3	Q86UY8	548 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	HORMAD1	Q86X24	394 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	CCDC13	Q8IYE1	715 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	UBL4B	Q8N7F7	174 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	PAF1	Q8N7H5	531 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	KRT35	Q92764	455 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	SERAC1	Q96JX3	654 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	MGME1	Q9BQP7	344 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	ORAI3	Q9BRQ5	295 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	TMEM9B	Q9NQ34	198 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	SCUBE2	Q9NQ36	999 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	TRIM10	Q9UDY6	481 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	EFR3B	Q9Y2G0	817 aa		13.96	□□□□□ -0.17
PTPN7-215	ENST00000492451	CACNA1E	Q15878	2313 aa		13.96	□□□□□ -0.18
PTPN7-215	ENST00000492451	hCG_1818297	A0A087WSY0	165 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	TSPAN11	A1L157	253 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	PRAMEF26	H0Y7S4	382 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	MUSK	O15146	869 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	CST8	O60676	142 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	SOCS5	O75159	536 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	MAP3K6	O95382	1288 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	PIGN	O95427	931 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	KRT10	P13645	584 aa		13.95	□□□□□ -0.18
PTPN7-215	ENST00000492451	TIMP2	P16035	220 aa		13.95	□□□□□ -0.18

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