RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 OTUD1Q5VV17 481 aaPredicted RBP11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 C22orf39Q6P5X5 142 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 LINGO4Q6UY18 593 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 DPY19L3Q6ZPD9 716 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 PARGQ86W56 976 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 ZNF683Q8IZ20 524 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 FMR1NBQ8N0W7 255 aaPredicted RBP11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 TTC13Q8NBP0 860 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 CCDC34Q96HJ3 373 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 FEM1CQ96JP0 617 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 TMEM74Q96NL1 305 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 CPXM1Q96SM3 734 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 KLF6Q99612 283 aaPredicted RBP11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 INTS2Q9H0H0 1204 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 SIK2Q9H0K1 926 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 RUBCNLQ9H714 662 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 GDPD2Q9HCC8 539 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 UBE2TQ9NPD8 197 aaPredicted RBP11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 ANLNQ9NQW6 1124 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 IL36AQ9UHA7 158 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 LOXL2Q9Y4K0 774 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 FADS3Q9Y5Q0 445 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 SNX10Q9Y5X0 201 aa11.9□□□□□ -0.5
CACNA1C-228ENST00000492150 UNC13CQ8NB66 2214 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 A0A0D9SEW6 157 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 HEATR9A2RTY3 570 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 TTLL8A6PVC2 850 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 C9orf172C9J069 976 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 D6RAR5 112 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 H3BM21 787 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 HSF2BPO75031 334 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 ADCY5O95622 1261 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 ADRB3P13945 408 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 JUNDP17535 347 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 GNA15P30679 374 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 RABIFP47224 123 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 RPIAP49247 311 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 CLCN6P51797 869 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 NEK3P51956 506 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 KIAA1161Q6NSJ0 714 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 TTI2Q6NXR4 508 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 FAM183BPQ6ZVS7 135 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 TRIM59Q8IWR1 403 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 MCEMP1Q8IX19 187 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 DCAF4L2Q8NA75 395 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 LMX1AQ8TE12 382 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 NKD1Q969G9 470 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 DHTKD1Q96HY7 919 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 PPP1R16AQ96I34 528 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 PPP1R13BQ96KQ4 1090 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 LENG8Q96PV6 779 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 CCDC3Q9BQI4 270 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 BOCQ9BWV1 1114 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 C1QTNF2Q9BXJ5 285 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 GTPBP4Q9BZE4 634 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 TCEAL2Q9H3H9 227 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 IPO11Q9UI26 975 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 PNMA8BQ9ULN7 279 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 MAP4K5Q9Y4K4 846 aa11.89□□□□□ -0.51
CACNA1C-228ENST00000492150 DRGXA6NNA5 263 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 BECN2A8MW95 431 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 PSMA7O14818 248 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 MUSKO15146 869 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 AP1G1O43747 822 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 GCATO75600 419 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 FAM155BO75949 473 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 ENDOD1O94919 500 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 SMC2O95347 1197 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 LIFP15018 202 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 TFE3P19532 575 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 ITIH1P19827 911 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 L1CAMP32004 1257 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 CXCR3P49682 368 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 MTA1Q13330 715 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 PDE1CQ14123 709 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 EIF2S3LQ2VIR3 472 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 ISM2Q6H9L7 571 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 OLFML1Q6UWY5 402 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 PARS2Q7L3T8 475 aaKnown RBP11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 SETD3Q86TU7 594 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 SLC35F3Q8IY50 421 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 RBFAQ8N0V3 343 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 OR7D4Q8NG98 312 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 GLMNQ92990 594 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 USP7Q93009 1102 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 SMARCE1Q969G3 411 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 SLC45A3Q96JT2 553 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 IL12RB2Q99665 862 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 TKTL2Q9H0I9 626 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 PIGVQ9NUD9 493 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 ARHGEF38Q9NXL2 777 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 MPP6Q9NZW5 540 aa11.88□□□□□ -0.51
CACNA1C-228ENST00000492150 ARHGAP10A1A4S6 786 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 IGLON5A6NGN9 336 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 M0QYT0 321 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 FPGTO14772 594 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 DAB1O75553 588 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 ZMPSTE24O75844 475 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 ERBB2P04626 1255 aa11.87□□□□□ -0.51
CACNA1C-228ENST00000492150 NOS2P35228 1153 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms