RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	KIF3A	Q9Y496	699 aa		2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	COPG1	Q9Y678	874 aa	Known RBP	2.68	□□□□□ -1.98
PUM3-204	ENST00000490444	TDRD9	Q8NDG6	1382 aa	Known RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444		A0A0B4J203	849 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	KRT87P	A6NCN2	255 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	AGAP5	A6NIR3	686 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	C2CD4B	A6NLJ0	364 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	EFCAB8	A8MWE9	144 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	AKR1B15	C9JRZ8	316 aa	Predicted RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444		E5RJQ4	531 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	CASQ2	O14958	399 aa	Predicted RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	TXNL1	O43396	289 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	KLHL41	O60662	606 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	TSC22D2	O75157	780 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	CNTN5	O94779	1100 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	TMEM63A	O94886	807 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	APBB3	O95704	486 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	PLAU	P00749	431 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	ACADM	P11310	421 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	SFTPC	P11686	197 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	TMOD1	P28289	359 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	SLC8A1	P32418	973 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	NNMT	P40261	264 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	PSMC4	P43686	418 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	VPS41	P49754	854 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	RRP1	P56182	461 aa	Known RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	VAMP2	P63027	116 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	RBP5	P82980	135 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	SHC2	P98077	582 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	MC1R	Q01726	317 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	UBE3A	Q05086	875 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	KLHL30	Q0D2K2	578 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	CUL4B	Q13620	913 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	CBFB	Q13951	182 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	EIF4A2	Q14240	407 aa	Known RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	COG2	Q14746	738 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	TBRG1	Q3YBR2	411 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	EARS2	Q5JPH6	523 aa	Known RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	TAF3	Q5VWG9	929 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	ANKRD40	Q6AI12	368 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	DGAT2L7P	Q6IED9	249 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	ACAD10	Q6JQN1	1059 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	C11orf88	Q6PI97	169 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	SLC22A25	Q6T423	547 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	FIP1L1	Q6UN15	594 aa	Known RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	KIAA1324	Q6UXG2	1013 aa	Known RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	RBM44	Q6ZP01	1051 aa	Known RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	RUFY3	Q7L099	469 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	MEPCE	Q7L2J0	689 aa	Known RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	RRAGA	Q7L523	313 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	PPP1R42	Q7Z4L9	355 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	SLFN11	Q7Z7L1	901 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	ZER1	Q7Z7L7	766 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	PRPF39	Q86UA1	669 aa	Known RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	RHPN2	Q8IUC4	686 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	THNSL1	Q8IYQ7	743 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	TAGAP	Q8N103	731 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	NGEF	Q8N5V2	710 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	KCTD6	Q8NC69	237 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	IPMK	Q8NFU5	416 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	OR52N4	Q8NGI2	321 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	OSR1	Q8TAX0	266 aa	Predicted RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	FBXO30	Q8TB52	745 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	ANKRD49	Q8WVL7	239 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	HMGB4	Q8WW32	186 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	THAP4	Q8WY91	577 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	HSPH1	Q92598	858 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	ZNF75CP	Q92670	426 aa	Predicted RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	SDCCAG3	Q96C92	435 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	CALML4	Q96GE6	196 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	FEM1C	Q96JP0	617 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	NEK1	Q96PY6	1258 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	TMEM237	Q96Q45	408 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	ZNF347	Q96SE7	839 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	HERC2P3	Q9BVR0	1158 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	RABEP2	Q9H5N1	569 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	TXNRD2	Q9NNW7	524 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	SAYSD1	Q9NPB0	183 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	LIN7C	Q9NUP9	197 aa	Known RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	ZNHIT6	Q9NWK9	470 aa	Known RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	ADPRHL2	Q9NX46	363 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	SUN2	Q9UH99	717 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	CHORDC1	Q9UHD1	332 aa	Predicted RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	KCND3	Q9UK17	655 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	HPCAL4	Q9UM19	191 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	HEMK1	Q9Y5R4	338 aa	Predicted RBP	2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	AP1M2	Q9Y6Q5	423 aa		2.67	□□□□□ -1.98
PUM3-204	ENST00000490444	SLC22A23	A1A5C7	686 aa		2.66	□□□□□ -1.98
PUM3-204	ENST00000490444	HMX3	A6NHT5	357 aa		2.66	□□□□□ -1.98
PUM3-204	ENST00000490444	C3orf70	A6NLC5	250 aa	Predicted RBP	2.66	□□□□□ -1.98
PUM3-204	ENST00000490444	TTC34	A8MYJ7	566 aa		2.66	□□□□□ -1.98
PUM3-204	ENST00000490444	TAF4	O00268	1085 aa		2.66	□□□□□ -1.98
PUM3-204	ENST00000490444	SPTLC2	O15270	562 aa		2.66	□□□□□ -1.98
PUM3-204	ENST00000490444	CNOT3	O75175	753 aa	Known RBP	2.66	□□□□□ -1.98
PUM3-204	ENST00000490444	ERAL1	O75616	437 aa	Known RBP	2.66	□□□□□ -1.98
PUM3-204	ENST00000490444	SLC22A3	O75751	556 aa		2.66	□□□□□ -1.98
PUM3-204	ENST00000490444	BBOX1	O75936	387 aa		2.66	□□□□□ -1.98
PUM3-204	ENST00000490444	BEST1	O76090	585 aa		2.66	□□□□□ -1.98
PUM3-204	ENST00000490444	SCGB1D1	O95968	90 aa		2.66	□□□□□ -1.98
PUM3-204	ENST00000490444	FGB	P02675	491 aa		2.66	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms