RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 IGLV2-11P01706 119 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 CHRM4P08173 479 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 DHRS4L1P0CG22 281 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 GAGE12FP0CL80 117 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 GAGE12GP0CL81 117 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 GAGE12IP0CL82 117 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 CD72P21854 359 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 CHKAP35790 457 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 LIFRP42702 1097 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 ECT2LQ008S8 904 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 GAGE1Q13065 139 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 GAGE4Q13068 117 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 PRKG1Q13976 671 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 DHX34Q14147 1143 aaKnown RBP3.91□□□□□ -1.78
HMGN1-218ENST00000490032 KRTAP27-1Q3LI81 207 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 RHBDF2Q6PJF5 856 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 ZNF771Q7L3S4 317 aaPredicted RBP3.91□□□□□ -1.78
HMGN1-218ENST00000490032 MOGAT3Q86VF5 341 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 SFTPA2Q8IWL1 248 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 CCDC105Q8IYK2 499 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 NAGSQ8N159 534 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 TMEM57Q8N5G2 664 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 ANKRD44Q8N8A2 993 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 HSPH1Q92598 858 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 PAGR1Q9BTK6 254 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 MMTAG2Q9BU76 263 aaKnown RBP3.91□□□□□ -1.78
HMGN1-218ENST00000490032 DONSONQ9NYP3 566 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 DNAJC16Q9Y2G8 782 aa3.91□□□□□ -1.78
HMGN1-218ENST00000490032 B9A039 149 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 TULP2O00295 520 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 SLC25A17O43808 307 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 RYKP34925 604 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 IL20RBQ6UXL0 311 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 MEX3BQ6ZN04 569 aaKnown RBP3.9□□□□□ -1.79
HMGN1-218ENST00000490032 PRSS45Q7RTY3 260 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 DNAAF1Q8NEP3 725 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 ARRDC2Q8TBH0 407 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 AFG1LQ8WV93 481 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 ZNF385AQ96PM9 386 aaKnown RBP3.9□□□□□ -1.79
HMGN1-218ENST00000490032 MPHOSPH6Q99547 160 aaKnown RBP3.9□□□□□ -1.79
HMGN1-218ENST00000490032 CLSTN3Q9BQT9 956 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 NDRG3Q9UGV2 375 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 FEM1BQ9UK73 627 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 GDAQ9Y2T3 454 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 PAM16Q9Y3D7 125 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 RIPOR2Q9Y4F9 1068 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 ADGRF5Q8IZF2 1346 aa3.9□□□□□ -1.79
HMGN1-218ENST00000490032 hCG_1642624A0A1W2PR95 340 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 CBY3A6NI87 242 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 FAM90A7PA6NKC0 464 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 FAM90A22PA8MWA6 464 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 FAM90A12PA8MX19 464 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 FAM90A23PA8MXZ1 464 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 PRAC2D3DTV9 90 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 GAS8-AS1O95177 125 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 AFPP02771 609 aaKnown RBP3.89□□□□□ -1.79
HMGN1-218ENST00000490032 CNPP09543 421 aaKnown RBP3.89□□□□□ -1.79
HMGN1-218ENST00000490032 SRD5A1P18405 259 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 SSTR2P30874 369 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 CXCR3P49682 368 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 DDR1Q08345 913 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 PDCD2Q16342 344 aaPredicted RBP3.89□□□□□ -1.79
HMGN1-218ENST00000490032 CALCRLQ16602 461 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 DSTYKQ6XUX3 929 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 SMIM29Q86T20 159 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 EXOC3L1Q86VI1 746 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 TMPRSS12Q86WS5 348 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 HERC6Q8IVU3 1022 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 FTSJ3Q8IY81 847 aaKnown RBP3.89□□□□□ -1.79
HMGN1-218ENST00000490032 MYCT1Q8N699 235 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 ENAHQ8N8S7 591 aaPredicted RBP3.89□□□□□ -1.79
HMGN1-218ENST00000490032 RAB40AQ8WXH6 277 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 SORCS1Q8WY21 1168 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 RILPL2Q969X0 211 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 NODALQ96S42 347 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 FAM167BQ9BTA0 163 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 LMAN2LQ9H0V9 348 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 MALT1Q9UDY8 824 aa3.89□□□□□ -1.79
HMGN1-218ENST00000490032 ERRFI1Q9UJM3 462 aaPredicted RBP3.89□□□□□ -1.79
HMGN1-218ENST00000490032 C17orf113A0A1B0GUU1 675 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 CYSRT1A8MQ03 144 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 HSPA12AO43301 675 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 PMS2P2O95744 297 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 RXRAP19793 462 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 TCEA1P23193 301 aaKnown RBP3.88□□□□□ -1.79
HMGN1-218ENST00000490032 BLKP51451 505 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 EFR3AQ14156 821 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 ADCK5Q3MIX3 580 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 CHD1LQ86WJ1 897 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 FOXP4Q8IVH2 680 aaPredicted RBP3.88□□□□□ -1.79
HMGN1-218ENST00000490032 USP38Q8NB14 1042 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 POC1AQ8NBT0 407 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 CEP70Q8NHQ1 597 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 SPATA20Q8TB22 786 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 GDPD5Q8WTR4 605 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 SNAPC3Q92966 411 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 SPRY4Q9C004 299 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 UBTD1Q9HAC8 227 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 EBF2Q9HAK2 575 aa3.88□□□□□ -1.79
HMGN1-218ENST00000490032 NOD2Q9HC29 1040 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms