RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 HLA-BQ31612 363 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 SEL1L2Q5TEA6 688 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 AFMIDQ63HM1 303 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 C22orf39Q6P5X5 142 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 LINGO4Q6UY18 593 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 ADAT2Q7Z6V5 191 aaKnown RBP10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 NAXDQ8IW45 347 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 TP53INP2Q8IXH6 220 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 PCDH20Q8N6Y1 951 aaKnown RBP10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 TMIEQ8NEW7 156 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 OR2A12Q8NGT7 310 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 CAPZA3Q96KX2 299 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 EPAS1Q99814 870 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 ACE2Q9BYF1 805 aaPredicted RBP10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 MAGEH1Q9H213 219 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 NOL6Q9H6R4 1146 aaKnown RBP10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 RNF14Q9UBS8 474 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 SARDHQ9UL12 918 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 ANKRD6Q9Y2G4 727 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 PCDHGB2Q9Y5G2 931 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 SLCO1B1Q9Y6L6 691 aa10.73□□□□□ -0.69
SCAMP4-208ENST00000489554 TBC1D3DA0A087WVF3 549 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 TBC1D3IA0A087WXS9 549 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 TBC1D3EA0A087X179 549 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 TBC1D3KA0A087X1G2 549 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 TBC1D3FA6NER0 549 aaPredicted RBP10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 TBC1D3LB9A6J9 549 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 H3BRJ5 948 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 PGRMC1O00264 195 aaKnown RBP10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 VILLO15195 856 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 SMAD6O43541 496 aaKnown RBP10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 LATO43561 262 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 MFSD11O43934 449 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 SH3BP5O60239 455 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 DFNA5O60443 496 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 CST8O60676 142 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 RAMP2O60895 175 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 TBC1D3HP0C7X1 549 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 GLDCP23378 1020 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 MCM3P25205 808 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 EPHB2P29323 1055 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 ARL4AP40617 200 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 METAP1P53582 386 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 C21orf59P57076 290 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 SIM1P81133 766 aaPredicted RBP10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 ARF5P84085 180 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 GBE1Q04446 702 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 CNTN1Q12860 1018 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 SUZ12Q15022 739 aaKnown RBP10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 PAFAH1B3Q15102 231 aaKnown RBP10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 KIF19Q2TAC6 998 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 SLC45A4Q5BKX6 768 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 AGBL4Q5VU57 503 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 KAZNQ674X7 775 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 TBC1D3GQ6DHY5 549 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 TBC1D3CQ6IPX1 549 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 CCDC70Q6NSX1 233 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 NPNTQ6UXI9 565 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 PRPF39Q86UA1 669 aaKnown RBP10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 TRIM69Q86WT6 500 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 CCDC50Q8IVM0 306 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 MAP7D3Q8IWC1 876 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 ARHGAP12Q8IWW6 846 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 TBC1D3Q8IZP1 549 aaPredicted RBP10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 RTL3Q8N8U3 475 aaKnown RBP10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 PRELID2Q8N945 189 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 LRRN4CLQ8ND94 238 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 ARHGEF2Q92974 986 aaKnown RBP10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 ISG20Q96AZ6 181 aaKnown RBP10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 PPP1R16AQ96I34 528 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 OLFM3Q96PB7 478 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 IL21RQ9HBE5 538 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 PREBQ9HCU5 417 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 DYRK4Q9NR20 520 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 TM7SF3Q9NS93 570 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 SAE1Q9UBE0 346 aaPredicted RBP10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 IL36AQ9UHA7 158 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 HPCAL4Q9UM19 191 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 FNDC3AQ9Y2H6 1198 aaKnown RBP10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 PCDHB9Q9Y5E1 797 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 SNX11Q9Y5W9 270 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 NUMA1Q14980 2115 aa10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 ASCC3Q8N3C0 2202 aaKnown RBP10.72□□□□□ -0.69
SCAMP4-208ENST00000489554 LAMA1P25391 3075 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 CTAGE15A4D2H0 777 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 ZSCAN5CA6NGD5 496 aaPredicted RBP10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 PLK4O00444 970 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 KPNA3O00505 521 aaPredicted RBP10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 FGF10O15520 208 aaPredicted RBP10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 FLRT2O43155 660 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 TRIM16O95361 564 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 CTSLP07711 333 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 CTAGE8P0CG41 777 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 CD38P28907 300 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 CTSKP43235 329 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 DYNLT1P63172 113 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 POLD3Q15054 466 aaPredicted RBP10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 NOMO1Q15155 1222 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 CYP1B1Q16678 543 aa10.71□□□□□ -0.69
SCAMP4-208ENST00000489554 POM121L1PQ3SYA9 428 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms