RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 ZNF28P17035 718 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 IFNAR1P17181 557 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 EGR1P18146 543 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 MPSTP25325 297 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 CSF2RBP32927 897 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 ADD1P35611 737 aaKnown RBP7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 TDGF1P3P51864 188 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 CEBPZQ03701 1054 aaKnown RBP7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 RAPSNQ13702 412 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 NR1D2Q14995 579 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 ZRSR1Q15695 479 aaKnown RBP7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 SOWAHAQ2M3V2 549 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 MPPE1Q53F39 396 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 FAXCQ5TGI0 409 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 FAAH2Q6GMR7 532 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 OGFOD3Q6PK18 319 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 CHSY3Q70JA7 882 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 SFTPA2Q8IWL1 248 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 PPM1NQ8N819 430 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 GALNT6Q8NCL4 622 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 KBTBD7Q8WVZ9 684 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 LMLNQ96KR4 655 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 SPAG5Q96R06 1193 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 SLC26A6Q9BXS9 759 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 ULBP3Q9BZM4 244 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 ZNF518BQ9C0D4 1074 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 RBSNQ9H1K0 784 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 TLR8Q9NR97 1041 aaKnown RBP7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 COMMD8Q9NX08 183 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 VPS51Q9UID3 782 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 BTRCQ9Y297 605 aa7.62□□□□□ -1.19
EXOSC3-206ENST00000489414 ARHGEF35A5YM69 484 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 C21orf140B9A014 251 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 SMAD7O15105 426 aaKnown RBP7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 DEXIO95424 95 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 GCFC2P16383 781 aaKnown RBP7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 CSKP41240 450 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 MATR3P43243 847 aaKnown RBP eCLIP7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 TSFMP43897 325 aaKnown RBP7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 LAMB3Q13751 1172 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 KCNAB1Q14722 419 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 TCEA2Q15560 299 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 PDCD2Q16342 344 aaPredicted RBP7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 MDH1BQ5I0G3 518 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 FAM46CQ5VWP2 391 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 SHEQ5VZ18 495 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 FCRL6Q6DN72 434 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 SASS6Q6UVJ0 657 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 PAMR1Q6UXH9 720 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 LIMS2Q7Z4I7 341 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 TECPR1Q7Z6L1 1165 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 NEK8Q86SG6 692 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 GKN2Q86XP6 184 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 DENND1CQ8IV53 801 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 SYT2Q8N9I0 419 aaPredicted RBP7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 ROBO4Q8WZ75 1007 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 KCNK16Q96T55 309 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 KLF6Q99612 283 aaPredicted RBP7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 RNF26Q9BY78 433 aaPredicted RBP7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 EDEM3Q9BZQ6 932 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 CLSTN2Q9H4D0 955 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 ASB7Q9H672 318 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 BRMS1Q9HCU9 246 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 OLAHQ9NV23 265 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 TMEM9Q9P0T7 183 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 APEX2Q9UBZ4 518 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 CPSF3Q9UKF6 684 aaKnown RBP7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 NUDT5Q9UKK9 219 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 NOVA2Q9UNW9 492 aaKnown RBP7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 KIAA1024Q9UPX6 916 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 ERVW-1Q9UQF0 538 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 SNX9Q9Y5X1 595 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 FHOD1Q9Y613 1164 aa7.61□□□□□ -1.19
EXOSC3-206ENST00000489414 FAM187AA6NFU0 413 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 FPGTO14772 594 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 SPTLC2O15270 562 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 OGTO15294 1046 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 CTAG2O75638 210 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 KIF20AO95235 890 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 ATE1O95260 518 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 PAK4O96013 591 aaPredicted RBP7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 SRPRAP08240 638 aaKnown RBP7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 PLA2G4BP0C869 781 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 LPOP22079 712 aaPredicted RBP7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 ALDH4A1P30038 563 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 CDC25AP30304 524 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 POLR2BP30876 1174 aaKnown RBP7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 GARSP41250 739 aaKnown RBP7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 CTSOP43234 321 aaPredicted RBP7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 HK3P52790 923 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 PRR20EP86478 221 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 PRR20CP86479 221 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 PRR20DP86480 221 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 PRR20BP86481 221 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 PRR20AP86496 221 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 PPARDQ03181 441 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 STRN3Q13033 797 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 SQSTM1Q13501 440 aa7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.6□□□□□ -1.19
EXOSC3-206ENST00000489414 ZNF324BQ6AW86 544 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms