RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 TNFSF14O43557 240 aa25.29■■□□□ 1.64
HMGN1-217ENST00000489072 DKK1O94907 266 aa25.29■■□□□ 1.64
HMGN1-217ENST00000489072 TIMP2P16035 220 aa25.29■■□□□ 1.64
HMGN1-217ENST00000489072 AMPD1P23109 780 aa25.29■■□□□ 1.64
HMGN1-217ENST00000489072 TTC7BQ86TV6 843 aa25.29■■□□□ 1.64
HMGN1-217ENST00000489072 SLC22A18ASQ8N1D0 253 aa25.29■■□□□ 1.64
HMGN1-217ENST00000489072 TEKT4Q8WW24 435 aa25.29■■□□□ 1.64
HMGN1-217ENST00000489072 GATA6Q92908 595 aa25.29■■□□□ 1.64
HMGN1-217ENST00000489072 BMFQ96LC9 184 aa25.29■■□□□ 1.64
HMGN1-217ENST00000489072 CSPG4P5Q96PW8 444 aa25.29■■□□□ 1.64
HMGN1-217ENST00000489072 KLF6Q99612 283 aaPredicted RBP25.29■■□□□ 1.64
HMGN1-217ENST00000489072 CAAP1Q9H8G2 361 aa25.29■■□□□ 1.64
HMGN1-217ENST00000489072 PCDH18Q9HCL0 1135 aa25.29■■□□□ 1.64
HMGN1-217ENST00000489072 DKK3Q9UBP4 350 aa25.29■■□□□ 1.64
HMGN1-217ENST00000489072 GOLGA4Q13439 2230 aaKnown RBP25.28■■□□□ 1.64
HMGN1-217ENST00000489072 SHROOM3Q8TF72 1996 aa25.28■■□□□ 1.64
HMGN1-217ENST00000489072 FAM221BA6H8Z2 402 aa25.28■■□□□ 1.64
HMGN1-217ENST00000489072 POM121BA6NF01 834 aa25.28■■□□□ 1.64
HMGN1-217ENST00000489072 GOLGA8CPA6NN73 597 aa25.28■■□□□ 1.64
HMGN1-217ENST00000489072 MYO1FO00160 1098 aa25.28■■□□□ 1.64
HMGN1-217ENST00000489072 NEMP1O14524 444 aa25.28■■□□□ 1.64
HMGN1-217ENST00000489072 BUB1BO60566 1050 aaPredicted RBP25.28■■□□□ 1.64
HMGN1-217ENST00000489072 ARL4AP40617 200 aa25.28■■□□□ 1.64
HMGN1-217ENST00000489072 SLC18A3Q16572 532 aa25.28■■□□□ 1.64
HMGN1-217ENST00000489072 UNQ6494/PRO21346Q6UXR6 183 aa25.28■■□□□ 1.64
HMGN1-217ENST00000489072 TSEN2Q8NCE0 465 aaKnown RBP25.28■■□□□ 1.64
HMGN1-217ENST00000489072 ZNF564Q8TBZ8 553 aaPredicted RBP25.28■■□□□ 1.64
HMGN1-217ENST00000489072 CALN1Q9BXU9 219 aa25.28■■□□□ 1.64
HMGN1-217ENST00000489072 SP110Q9HB58 689 aa25.28■■□□□ 1.64
HMGN1-217ENST00000489072 FTSJ1Q9UET6 329 aa25.28■■□□□ 1.64
HMGN1-217ENST00000489072 IPO11Q9UI26 975 aaKnown RBP25.28■■□□□ 1.64
HMGN1-217ENST00000489072 MSRB2Q9Y3D2 182 aa25.28■■□□□ 1.64
HMGN1-217ENST00000489072 HS3ST3A1Q9Y663 406 aa25.28■■□□□ 1.64
HMGN1-217ENST00000489072 WDFY3Q8IZQ1 3526 aa25.27■■□□□ 1.64
HMGN1-217ENST00000489072 A6NNZ2 444 aa25.27■■□□□ 1.64
HMGN1-217ENST00000489072 SDC3O75056 442 aa25.27■■□□□ 1.64
HMGN1-217ENST00000489072 PALMO75781 387 aa25.27■■□□□ 1.64
HMGN1-217ENST00000489072 IL10RBQ08334 325 aa25.27■■□□□ 1.64
HMGN1-217ENST00000489072 Q6ZSR6 202 aa25.27■■□□□ 1.64
HMGN1-217ENST00000489072 ZSCAN30Q86W11 494 aa25.27■■□□□ 1.64
HMGN1-217ENST00000489072 LZTR1Q8N653 840 aa25.27■■□□□ 1.64
HMGN1-217ENST00000489072 EID2Q8N6I1 236 aa25.27■■□□□ 1.64
HMGN1-217ENST00000489072 TSC1Q92574 1164 aa25.27■■□□□ 1.64
HMGN1-217ENST00000489072 LENG8Q96PV6 779 aaPredicted RBP25.27■■□□□ 1.64
HMGN1-217ENST00000489072 GPR27Q9NS67 375 aa25.27■■□□□ 1.64
HMGN1-217ENST00000489072 TSPAN11A1L157 253 aa25.26■■□□□ 1.63
HMGN1-217ENST00000489072 MUSKO15146 869 aa25.26■■□□□ 1.63
HMGN1-217ENST00000489072 SGCGQ13326 291 aa25.26■■□□□ 1.63
HMGN1-217ENST00000489072 ST3GAL2Q16842 350 aa25.26■■□□□ 1.63
HMGN1-217ENST00000489072 TMCO3Q6UWJ1 677 aa25.26■■□□□ 1.63
HMGN1-217ENST00000489072 KYAT3Q6YP21 454 aaKnown RBP25.26■■□□□ 1.63
HMGN1-217ENST00000489072 KDM7AQ6ZMT4 941 aa25.26■■□□□ 1.63
HMGN1-217ENST00000489072 PTAR1Q7Z6K3 402 aaPredicted RBP25.26■■□□□ 1.63
HMGN1-217ENST00000489072 SRLQ86TD4 932 aa25.26■■□□□ 1.63
HMGN1-217ENST00000489072 ASB12Q8WXK4 309 aa25.26■■□□□ 1.63
HMGN1-217ENST00000489072 SUV39H2Q9H5I1 410 aa25.26■■□□□ 1.63
HMGN1-217ENST00000489072 ABHD10Q9NUJ1 306 aa25.26■■□□□ 1.63
HMGN1-217ENST00000489072 KLHL11Q9NVR0 708 aa25.26■■□□□ 1.63
HMGN1-217ENST00000489072 CTTNBP2NLQ9P2B4 639 aa25.26■■□□□ 1.63
HMGN1-217ENST00000489072 SSU72P8A0A1W2PR75 194 aa25.25■■□□□ 1.63
HMGN1-217ENST00000489072 MMP20O60882 483 aa25.25■■□□□ 1.63
HMGN1-217ENST00000489072 MFAP3LO75121 409 aa25.25■■□□□ 1.63
HMGN1-217ENST00000489072 PROS1P07225 676 aa25.25■■□□□ 1.63
HMGN1-217ENST00000489072 CSNK1DP48730 415 aa25.25■■□□□ 1.63
HMGN1-217ENST00000489072 ADKP55263 362 aaKnown RBP25.25■■□□□ 1.63
HMGN1-217ENST00000489072 ZSWIM9Q86XI8 627 aa25.25■■□□□ 1.63
HMGN1-217ENST00000489072 CAMK1DQ8IU85 385 aa25.25■■□□□ 1.63
HMGN1-217ENST00000489072 NSMCE3Q96MG7 304 aa25.25■■□□□ 1.63
HMGN1-217ENST00000489072 CHP1Q99653 195 aa25.25■■□□□ 1.63
HMGN1-217ENST00000489072 CINPQ9BW66 212 aaPredicted RBP25.25■■□□□ 1.63
HMGN1-217ENST00000489072 ZZEF1O43149 2961 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 CD48P09326 243 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 H2AFZP0C0S5 128 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 IL4RP24394 825 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 SSR1P43307 286 aaKnown RBP25.24■■□□□ 1.63
HMGN1-217ENST00000489072 ARSEP51690 589 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 CDH6P55285 790 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 MMRN1Q13201 1228 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 RFTN1Q14699 578 aaPredicted RBP25.24■■□□□ 1.63
HMGN1-217ENST00000489072 GRM3Q14832 879 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 ATP13A4Q4VNC1 1196 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 H2AFVQ71UI9 128 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 FAM174AQ8TBP5 190 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 FAM71BQ8TC56 605 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 HCAR2Q8TDS4 363 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 CTNNBL1Q8WYA6 563 aaPredicted RBP25.24■■□□□ 1.63
HMGN1-217ENST00000489072 CNDP2Q96KP4 475 aaKnown RBP25.24■■□□□ 1.63
HMGN1-217ENST00000489072 ZNF641Q96N77 438 aaPredicted RBP25.24■■□□□ 1.63
HMGN1-217ENST00000489072 TUBGCP5Q96RT8 1024 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 WRAP53Q9BUR4 548 aaKnown RBP25.24■■□□□ 1.63
HMGN1-217ENST00000489072 ZNHIT6Q9NWK9 470 aaKnown RBP25.24■■□□□ 1.63
HMGN1-217ENST00000489072 UVRAGQ9P2Y5 699 aa25.24■■□□□ 1.63
HMGN1-217ENST00000489072 ENC1O14682 589 aa25.23■■□□□ 1.63
HMGN1-217ENST00000489072 PROSCO94903 275 aa25.23■■□□□ 1.63
HMGN1-217ENST00000489072 LDOC1O95751 146 aaPredicted RBP25.23■■□□□ 1.63
HMGN1-217ENST00000489072 PEX11BO96011 259 aa25.23■■□□□ 1.63
HMGN1-217ENST00000489072 SLC10A7Q0GE19 358 aa25.23■■□□□ 1.63
HMGN1-217ENST00000489072 DNAJC3Q13217 504 aa25.23■■□□□ 1.63
HMGN1-217ENST00000489072 KRT81Q14533 505 aa25.23■■□□□ 1.63
HMGN1-217ENST00000489072 UGP2Q16851 508 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms