RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 LBRQ14739 615 aaKnown RBP9.23□□□□□ -0.93
HDAC6-232ENST00000489053 SLC18A3Q16572 532 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 TMEM259Q4ZIN3 620 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 LRRC73Q5JTD7 316 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 BRAT1Q6PJG6 821 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 UNQ6494/PRO21346Q6UXR6 183 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 Q6ZSR6 202 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 SRLQ86TD4 932 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 VSTM4Q8IW00 320 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 NDUFAF2Q8N183 169 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 GALNT15Q8N3T1 639 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 NIPA2Q8N8Q9 360 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 NETO2Q8NC67 525 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 DENND6BQ8NEG7 585 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 ATL2Q8NHH9 583 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-232ENST00000489053 PDCD6IPQ8WUM4 868 aaKnown RBP9.23□□□□□ -0.93
HDAC6-232ENST00000489053 BTBD6Q96KE9 485 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 ZNF641Q96N77 438 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-232ENST00000489053 ZNF599Q96NL3 588 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 CSPG4P5Q96PW8 444 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 TUBGCP5Q96RT8 1024 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 DNAJC7Q99615 494 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 CPEB1Q9BZB8 566 aaKnown RBP9.23□□□□□ -0.93
HDAC6-232ENST00000489053 KLC2Q9H0B6 622 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 SUV39H2Q9H5I1 410 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 NOL6Q9H6R4 1146 aaKnown RBP9.23□□□□□ -0.93
HDAC6-232ENST00000489053 LRRC19Q9H756 370 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 ABHD10Q9NUJ1 306 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 KLHL11Q9NVR0 708 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 ARHGAP20Q9P2F6 1191 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 DKK3Q9UBP4 350 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 KLK13Q9UKR3 277 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 ITM2BQ9Y287 266 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 MFHAS1Q9Y4C4 1052 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 TTLL3Q9Y4R7 772 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 HS3ST3A1Q9Y663 406 aa9.23□□□□□ -0.93
HDAC6-232ENST00000489053 TNRC6BQ9UPQ9 1833 aaKnown RBP9.23□□□□□ -0.93
HDAC6-232ENST00000489053 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-232ENST00000489053 SSU72P8A0A1W2PR75 194 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 TMEM8BA6NDV4 472 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 ENC1O14682 589 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 FFAR2O15552 330 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 MMP20O60882 483 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 CBFA2T3O75081 653 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 MFAP3LO75121 409 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 PROSCO94903 275 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 CD160O95971 181 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 ATXN1LP0C7T5 689 aaKnown RBP9.22□□□□□ -0.93
HDAC6-232ENST00000489053 AMPD1P23109 780 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 HTR1BP28222 390 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 HNRNPH3P31942 346 aaKnown RBP9.22□□□□□ -0.93
HDAC6-232ENST00000489053 ABL2P42684 1182 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 RXRGP48443 463 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 ADKP55263 362 aaKnown RBP9.22□□□□□ -0.93
HDAC6-232ENST00000489053 DPYSQ14117 519 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 PDE1CQ14123 709 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-232ENST00000489053 PDK2Q15119 407 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 CYTH1Q15438 398 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 KYAT3Q6YP21 454 aaKnown RBP9.22□□□□□ -0.93
HDAC6-232ENST00000489053 POLNQ7Z5Q5 900 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 GLRX5Q86SX6 157 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 PARGQ86W56 976 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 ARFGAP1Q8N6T3 406 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 TMEM145Q8NBT3 493 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 OR13H1Q8NG92 308 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 HCAR2Q8TDS4 363 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 SAP25Q8TEE9 199 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 ADAMTS14Q8WXS8 1223 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 MAK16Q9BXY0 300 aaKnown RBP9.22□□□□□ -0.93
HDAC6-232ENST00000489053 PCDH18Q9HCL0 1135 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 SCUBE2Q9NQ36 999 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 RCOR3Q9P2K3 495 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-232ENST00000489053 LHX3Q9UBR4 397 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 DOLKQ9UPQ8 538 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 ZFR2Q9UPR6 939 aaKnown RBP9.22□□□□□ -0.93
HDAC6-232ENST00000489053 BTBD3Q9Y2F9 522 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 PCDH15Q96QU1 1955 aa9.22□□□□□ -0.93
HDAC6-232ENST00000489053 CEP192Q8TEP8 1941 aa9.21□□□□□ -0.93
HDAC6-232ENST00000489053 AKAP13Q12802 2813 aa9.21□□□□□ -0.93
HDAC6-232ENST00000489053 A0A1W2PQ67 120 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 INSIG1O15503 277 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 SPOPO43791 374 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 RFPL3O75679 317 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 TOP3BO95985 862 aaKnown RBP9.21□□□□□ -0.94
HDAC6-232ENST00000489053 PROS1P07225 676 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 TMEM253P0C7T8 217 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 ELFN1P0C7U0 828 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 TIMP2P16035 220 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 MX2P20592 715 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 CA4P22748 312 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 IL1R2P27930 398 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 MMP13P45452 471 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 CSNK1DP48730 415 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 DUSP3P51452 185 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-232ENST00000489053 NSUN2Q08J23 767 aaKnown RBP eCLIP9.21□□□□□ -0.94
HDAC6-232ENST00000489053 BNIP3Q12983 259 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 MESDQ14696 234 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 LRRC14Q15048 493 aa9.21□□□□□ -0.94
HDAC6-232ENST00000489053 SPA17Q15506 151 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms