RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 RAD51Q06609 339 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 CDK18Q07002 472 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 TRAF2Q12933 501 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 CCINQ13939 588 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 SPARCL1Q14515 664 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 HIF1AQ16665 826 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 SYCP2LQ5T4T6 812 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 C9orf64Q5T6V5 341 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 EMC10Q5UCC4 262 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 EMBQ6PCB8 327 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 CEP128Q6ZU80 1094 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 RELL1Q8IUW5 271 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 GSPT2Q8IYD1 628 aaKnown RBP16.18■□□□□ 0.18
CLDN11-208ENST00000488989 UBALD2Q8IYN6 164 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 ZNF687Q8N1G0 1237 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.18■□□□□ 0.18
CLDN11-208ENST00000488989 ZNF513Q8N8E2 541 aaPredicted RBP16.18■□□□□ 0.18
CLDN11-208ENST00000488989 HNRNPLLQ8WVV9 542 aaKnown RBP16.18■□□□□ 0.18
CLDN11-208ENST00000488989 LRIG1Q96JA1 1093 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 HEPHQ9BQS7 1158 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 FICDQ9BVA6 458 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 TXLNGYQ9BZA5 131 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 ARHGEF3Q9NR81 526 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 RAI2Q9Y5P3 530 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 STON1Q9Y6Q2 735 aa16.18■□□□□ 0.18
CLDN11-208ENST00000488989 GOLGA8MH3BSY2 632 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 ALOX15BO15296 676 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 NDST3O95803 873 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 AGTP01019 485 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 FAM153BP0C7A2 387 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 ATXN1LP0C7T5 689 aaKnown RBP16.17■□□□□ 0.18
CLDN11-208ENST00000488989 HLA-DPA1P20036 260 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 CA4P22748 312 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 PRKCHP24723 683 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 STARD6P59095 220 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 BCL2L1Q07817 233 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 CDH17Q12864 832 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 OLIG2Q13516 323 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 FAM153CQ494X1 144 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 MAP9Q49MG5 647 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 HSF5Q4G112 596 aaPredicted RBP16.17■□□□□ 0.18
CLDN11-208ENST00000488989 FNBP1LQ5T0N5 605 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 SERPINA13PQ6UXR4 307 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 ZNF852Q6ZMS4 543 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 PDIK1LQ8N165 341 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 CHST14Q8NCH0 376 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 OR52K1Q8NGK4 314 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 CAVIN3Q969G5 261 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 ECHDC3Q96DC8 303 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 PWWP2AQ96N64 755 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 ZNF641Q96N77 438 aaPredicted RBP16.17■□□□□ 0.18
CLDN11-208ENST00000488989 ACOX2Q99424 681 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 GABRG3Q99928 467 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 FSD1LQ9BXM9 530 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 ATP13A3Q9H7F0 1226 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 WASF2Q9Y6W5 498 aa16.17■□□□□ 0.18
CLDN11-208ENST00000488989 A0A1W2PQ67 120 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 SIN3BO75182 1162 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 USP12O75317 370 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 FGF1P05230 155 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 C7P10643 843 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 HLA-EP13747 358 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 SERPINA4P29622 427 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 NTSR1P30989 418 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 RPL26P61254 145 aaKnown RBP16.16■□□□□ 0.18
CLDN11-208ENST00000488989 MSLNQ13421 630 aaPredicted RBP16.16■□□□□ 0.18
CLDN11-208ENST00000488989 SLC1A5Q15758 541 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 PCSK7Q16549 785 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 MSS51Q4VC12 460 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 ARMC3Q5W041 872 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 CENPUQ71F23 418 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 TRMT11Q7Z4G4 463 aaKnown RBP16.16■□□□□ 0.18
CLDN11-208ENST00000488989 GJD3Q8N144 294 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 ZNF366Q8N895 744 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 OR6K2Q8NGY2 324 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 LRRC39Q96DD0 335 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 IFT43Q96FT9 208 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 SIGLEC10Q96LC7 697 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 OSBPL1AQ9BXW6 950 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 MTG2Q9H4K7 406 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 SUV39H2Q9H5I1 410 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 CACNA2D2Q9NY47 1150 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 RPL26L1Q9UNX3 145 aaKnown RBP16.16■□□□□ 0.18
CLDN11-208ENST00000488989 PCDHGC4Q9Y5F7 938 aa16.16■□□□□ 0.18
CLDN11-208ENST00000488989 TSPAN11A1L157 253 aa16.15■□□□□ 0.18
CLDN11-208ENST00000488989 KRBA1A5PL33 1030 aa16.15■□□□□ 0.18
CLDN11-208ENST00000488989 ERLIN1O75477 346 aa16.15■□□□□ 0.18
CLDN11-208ENST00000488989 PGLSO95336 258 aa16.15■□□□□ 0.18
CLDN11-208ENST00000488989 PIGNO95427 931 aa16.15■□□□□ 0.18
CLDN11-208ENST00000488989 CHRNB1P11230 501 aa16.15■□□□□ 0.18
CLDN11-208ENST00000488989 ALADP13716 330 aa16.15■□□□□ 0.18
CLDN11-208ENST00000488989 GKP32189 559 aa16.15■□□□□ 0.18
CLDN11-208ENST00000488989 TIE1P35590 1138 aa16.15■□□□□ 0.18
CLDN11-208ENST00000488989 NPY2RP49146 381 aa16.15■□□□□ 0.18
CLDN11-208ENST00000488989 DHX9Q08211 1270 aaKnown RBP16.15■□□□□ 0.18
CLDN11-208ENST00000488989 CAMK2GQ13555 558 aaPredicted RBP16.15■□□□□ 0.18
CLDN11-208ENST00000488989 ELAVL3Q14576 367 aaKnown RBP16.15■□□□□ 0.18
CLDN11-208ENST00000488989 SLMAPQ14BN4 828 aa16.15■□□□□ 0.18
CLDN11-208ENST00000488989 DNAJC21Q5F1R6 531 aaKnown RBP16.15■□□□□ 0.18
CLDN11-208ENST00000488989 ARMC12Q5T9G4 340 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms