RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 VEGFDO43915 354 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 HNRNPCL1O60812 293 aaKnown RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 TOX4O94842 621 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 WDR47O94967 919 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 JUNP05412 331 aaKnown RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CCDC159P0C7I6 412 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 SRCP12931 536 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 HOXB6P17509 224 aaKnown RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 ERCC2P18074 760 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 HK1P19367 917 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 PROZP22891 400 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 ADSSP30520 456 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CASQ1P31415 396 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 PBX1P40424 430 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CASRP41180 1078 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 PCP4P48539 62 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 PXNP49023 591 aaPredicted RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 GATMP50440 423 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 BMXP51813 675 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 EFNA5P52803 228 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CLRN1P58418 232 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 BPIFB4P59827 614 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 KCNJ10P78508 379 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 HMGN5P82970 282 aaKnown RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 ARF5P84085 180 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 TLE3Q04726 772 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 PPATQ06203 517 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 COX10Q12887 443 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 NPRL3Q12980 569 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 IFT88Q13099 833 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 RIN1Q13671 783 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CCNIQ14094 377 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 RCN2Q14257 317 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 UBXN2BQ14CS0 331 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 RPS6KA1Q15418 735 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 GSTA3Q16772 222 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 MYLK3Q32MK0 819 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 SH2D4BQ5SQS7 431 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CERCAMQ5T4B2 595 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 DAB2IPQ5VWQ8 1189 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 GLDNQ6ZMI3 551 aaPredicted RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 GBP6Q6ZN66 633 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CFAP77Q6ZQR2 320 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CLEC17AQ6ZS10 378 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 RRM2BQ7LG56 351 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 SLC46A3Q7Z3Q1 461 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 TMPRSS9Q7Z410 1059 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 SPATA19Q7Z5L4 167 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 TMEM200AQ86VY9 491 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 SPARTQ8N0X7 666 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 SFRP1Q8N474 314 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 TC2NQ8N9U0 490 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 ANKRD53Q8N9V6 530 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 BEND2Q8NDZ0 799 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 POC1BQ8TC44 478 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 HASPINQ8TF76 798 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 NOC3LQ8WTT2 800 aaKnown RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 PTPMT1Q8WUK0 201 aaPredicted RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 GIMAP1Q8WWP7 306 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 SHC3Q92529 594 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 WASF1Q92558 559 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 GCDHQ92947 438 aaPredicted RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 SMARCE1Q969G3 411 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 MMABQ96EY8 250 aaPredicted RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CDCA5Q96FF9 252 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 TRMT61AQ96FX7 289 aaKnown RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 FAR2Q96K12 515 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 PHACTR3Q96KR7 559 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 LINC00615Q96LM1 132 aaPredicted RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 NLRP4Q96MN2 994 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 NEK1Q96PY6 1258 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 PRAM1Q96QH2 718 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 KIFC3Q9BVG8 833 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 IMPG2Q9BZV3 1241 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 TRIM31Q9BZY9 425 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 KRT23Q9C075 422 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 GPR88Q9GZN0 384 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CLPBQ9H078 707 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 DENND2DQ9H6A0 471 aaPredicted RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 GBA2Q9HCG7 927 aaPredicted RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 PDE11AQ9HCR9 933 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 GDE1Q9NZC3 331 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CNIH4Q9P003 139 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CGNQ9P2M7 1197 aaKnown RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CRNNQ9UBG3 495 aaPredicted RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 HDAC6Q9UBN7 1215 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CPSF3Q9UKF6 684 aaKnown RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 TRPC5Q9UL62 973 aaPredicted RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 NDRG4Q9ULP0 352 aaKnown RBP3.51□□□□□ -1.85
PRPF4-203ENST00000488937 HPCAL4Q9UM19 191 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 KCNK7Q9Y2U2 307 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 KIF3AQ9Y496 699 aa3.51□□□□□ -1.85
PRPF4-203ENST00000488937 CYP3A7-CYP3A51PA0A087WV96 503 aa3.5□□□□□ -1.85
PRPF4-203ENST00000488937 A0A1W2PR77 199 aa3.5□□□□□ -1.85
PRPF4-203ENST00000488937 ARHGEF37A1IGU5 675 aa3.5□□□□□ -1.85
PRPF4-203ENST00000488937 WIPF3A6NGB9 483 aa3.5□□□□□ -1.85
PRPF4-203ENST00000488937 SERINC4A6NH21 518 aa3.5□□□□□ -1.85
PRPF4-203ENST00000488937 NPIPB13A6NJU9 1138 aa3.5□□□□□ -1.85
PRPF4-203ENST00000488937 TBKBP1A7MCY6 615 aa3.5□□□□□ -1.85
PRPF4-203ENST00000488937 NPIPB5A8MRT5 1133 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms