RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 CNTD1Q8N815 330 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 ACTRT1Q8TDG2 376 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 NKD2Q969F2 451 aaPredicted RBP16.13■□□□□ 0.17
HDAC7-224ENST00000488927 VOPP1Q96AW1 172 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 PPP1R2P1Q96PQ5 205 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 DUSP15Q9H1R2 295 aaPredicted RBP16.13■□□□□ 0.17
HDAC7-224ENST00000488927 SLC25A51Q9H1U9 297 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 SERGEFQ9UGK8 458 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 MBD1Q9UIS9 605 aaPredicted RBP16.13■□□□□ 0.17
HDAC7-224ENST00000488927 INVSQ9Y283 1065 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 R3HDM2Q9Y2K5 976 aaKnown RBP16.13■□□□□ 0.17
HDAC7-224ENST00000488927 SAR1BQ9Y6B6 198 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 CACNA1HO95180 2353 aa16.13■□□□□ 0.17
HDAC7-224ENST00000488927 KCNN4O15554 427 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 HTRA2O43464 458 aaPredicted RBP16.12■□□□□ 0.17
HDAC7-224ENST00000488927 PLRG1O43660 514 aaKnown RBP16.12■□□□□ 0.17
HDAC7-224ENST00000488927 AP1G1O43747 822 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 LIASO43766 372 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 PIGNO95427 931 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 TUBB4AP04350 444 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 XPAP23025 273 aaPredicted RBP16.12■□□□□ 0.17
HDAC7-224ENST00000488927 ACSL1P33121 698 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 METAP1P53582 386 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 ADPRHP54922 357 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 SRSF5Q13243 272 aaKnown RBP16.12■□□□□ 0.17
HDAC7-224ENST00000488927 PLK5Q496M5 336 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 PIP5KL1Q5T9C9 394 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 PMS2CLQ68D20 193 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 NEK5Q6P3R8 708 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 PRR23BQ6ZRT6 265 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 B4GALNT4Q76KP1 1039 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 PARS2Q7L3T8 475 aaKnown RBP16.12■□□□□ 0.17
HDAC7-224ENST00000488927 PID1Q7Z2X4 250 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 ADAT2Q7Z6V5 191 aaKnown RBP16.12■□□□□ 0.17
HDAC7-224ENST00000488927 C17orf53Q8N3J3 647 aaPredicted RBP16.12■□□□□ 0.17
HDAC7-224ENST00000488927 OR2T34Q8NGX1 318 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 OR14C36Q8NHC7 312 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 ARRDC2Q8TBH0 407 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 ECHDC3Q96DC8 303 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 LOXL4Q96JB6 756 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 FAM118BQ9BPY3 351 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 GPR174Q9BXC1 333 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 GLOD4Q9HC38 313 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 PREBQ9HCU5 417 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 CD93Q9NPY3 652 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 DNPEPQ9ULA0 475 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 WDFY4Q6ZS81 3184 aa16.12■□□□□ 0.17
HDAC7-224ENST00000488927 GOLGA6L10A0A0M3HER8 536 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 TRAFD1O14545 582 aaPredicted RBP16.11■□□□□ 0.17
HDAC7-224ENST00000488927 OPHN1O60890 802 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 BCKDHBP21953 392 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 CASQ1P31415 396 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 DPP6P42658 865 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 DSC2Q02487 901 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 ELP6Q0PNE2 266 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 ARMC12Q5T9G4 340 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 ERAP2Q6P179 960 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 TTC7BQ86TV6 843 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 NDUFAF2Q8N183 169 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 ZNF567Q8N184 647 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 FRMD1Q8N878 549 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 COG1Q8WTW3 980 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 IMP4Q96G21 291 aaKnown RBP16.11■□□□□ 0.17
HDAC7-224ENST00000488927 CEP41Q9BYV8 373 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 USP29Q9HBJ7 922 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 VPS45Q9NRW7 570 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 RNF14Q9UBS8 474 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 ZNF148Q9UQR1 794 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 RAI2Q9Y5P3 530 aa16.11■□□□□ 0.17
HDAC7-224ENST00000488927 MUC6Q6W4X9 2439 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 TBC1D3DA0A087WVF3 549 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 TBC1D3IA0A087WXS9 549 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 TBC1D3EA0A087X179 549 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 TBC1D3KA0A087X1G2 549 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 TBC1D3FA6NER0 549 aaPredicted RBP16.1■□□□□ 0.17
HDAC7-224ENST00000488927 C5orf60A6NFR6 353 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 UPK3BL1B0FP48 263 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 TBC1D3LB9A6J9 549 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 UPK3BL2E5RIL1 263 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 PROB1E7EW31 1015 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 TSPAN6O43657 245 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 GJB3O75712 270 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 ITGAVP06756 1048 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 TBC1D3HP0C7X1 549 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 ACTN2P35609 894 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 NUDT1P36639 197 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 CD86P42081 329 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 RPL26P61254 145 aaKnown RBP16.1■□□□□ 0.17
HDAC7-224ENST00000488927 NIPAL4Q0D2K0 466 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 SIX1Q15475 284 aaPredicted RBP16.1■□□□□ 0.17
HDAC7-224ENST00000488927 OASLQ15646 514 aaKnown RBP16.1■□□□□ 0.17
HDAC7-224ENST00000488927 UGP2Q16851 508 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 ANKRD20A2Q5SQ80 823 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 SYCP2LQ5T4T6 812 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 ANKRD20A1Q5TYW2 823 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 ANKRD20A3Q5VUR7 823 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 TBC1D3GQ6DHY5 549 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 LAIR1Q6GTX8 287 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 TBC1D3CQ6IPX1 549 aa16.1■□□□□ 0.17
HDAC7-224ENST00000488927 NYAP1Q6ZVC0 841 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms