RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 GDPD4Q6W3E5 623 aa19.31■□□□□ 0.68
GGPS1-206ENST00000488594 NLRP14Q86W24 1093 aa19.31■□□□□ 0.68
GGPS1-206ENST00000488594 FAM114A1Q8IWE2 563 aa19.31■□□□□ 0.68
GGPS1-206ENST00000488594 SDR16C5Q8N3Y7 309 aa19.31■□□□□ 0.68
GGPS1-206ENST00000488594 CXorf40AQ8TE69 158 aa19.31■□□□□ 0.68
GGPS1-206ENST00000488594 GDAP1L1Q96MZ0 367 aa19.31■□□□□ 0.68
GGPS1-206ENST00000488594 NDST4Q9H3R1 872 aa19.31■□□□□ 0.68
GGPS1-206ENST00000488594 SYNDIG1Q9H7V2 258 aa19.31■□□□□ 0.68
GGPS1-206ENST00000488594 TMEM248Q9NWD8 314 aa19.31■□□□□ 0.68
GGPS1-206ENST00000488594 TENM4Q6N022 2769 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 PMS2P1A4D2B8 440 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 TMEM110-MUSTN1A8MSY1 372 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 PLD2O14939 933 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 ALPIP09923 528 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 PEX5P50542 639 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 ATP11AP98196 1134 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 KCNC4Q03721 635 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 ZSCAN23Q3MJ62 389 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 C2CD6Q53TS8 623 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 TAF3Q5VWG9 929 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 MLKLQ8NB16 471 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 CASKIN2Q8WXE0 1202 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 VOPP1Q96AW1 172 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 EPAS1Q99814 870 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 STRADBQ9C0K7 418 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 CLPBQ9H078 707 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 NDFIP2Q9NV92 336 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 DNAI1Q9UI46 699 aa19.3■□□□□ 0.68
GGPS1-206ENST00000488594 PNMA8BQ9ULN7 279 aaPredicted RBP19.3■□□□□ 0.68
GGPS1-206ENST00000488594 DOCK4Q8N1I0 1966 aa19.29■□□□□ 0.68
GGPS1-206ENST00000488594 KDELR3O43731 214 aa19.29■□□□□ 0.68
GGPS1-206ENST00000488594 SLC28A2O43868 658 aa19.29■□□□□ 0.68
GGPS1-206ENST00000488594 MMP20O60882 483 aa19.29■□□□□ 0.68
GGPS1-206ENST00000488594 SUOXP51687 545 aa19.29■□□□□ 0.68
GGPS1-206ENST00000488594 VWA3BQ502W6 1294 aa19.29■□□□□ 0.68
GGPS1-206ENST00000488594 XKR5Q6UX68 686 aa19.29■□□□□ 0.68
GGPS1-206ENST00000488594 TP53I13Q8NBR0 393 aaPredicted RBP19.29■□□□□ 0.68
GGPS1-206ENST00000488594 DKK3Q9UBP4 350 aa19.29■□□□□ 0.68
GGPS1-206ENST00000488594 GULP1Q9UBP9 304 aa19.29■□□□□ 0.68
GGPS1-206ENST00000488594 GADD45BO75293 160 aaPredicted RBP19.28■□□□□ 0.68
GGPS1-206ENST00000488594 HTR1BP28222 390 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 SDC4P31431 198 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 HK3P52790 923 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 NOMO3P69849 1222 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 ATXN7L2Q5T6C5 722 aaPredicted RBP19.28■□□□□ 0.68
GGPS1-206ENST00000488594 NAA35Q5VZE5 725 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 DPY19L2P1Q6NXN4 242 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 NOP9Q86U38 636 aaKnown RBP19.28■□□□□ 0.68
GGPS1-206ENST00000488594 FBXO39Q8N4B4 442 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 EMC1Q8N766 993 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 OR6C4Q8NGE1 309 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 CPA5Q8WXQ8 436 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 TBC1D31Q96DN5 1066 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 GFM1Q96RP9 751 aaKnown RBP19.28■□□□□ 0.68
GGPS1-206ENST00000488594 TTYH3Q9C0H2 523 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 MBNL1Q9NR56 388 aaKnown RBP19.28■□□□□ 0.68
GGPS1-206ENST00000488594 METTL5Q9NRN9 209 aaKnown RBP19.28■□□□□ 0.68
GGPS1-206ENST00000488594 ACSL6Q9UKU0 697 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 MFHAS1Q9Y4C4 1052 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 FHOD1Q9Y613 1164 aa19.28■□□□□ 0.68
GGPS1-206ENST00000488594 BUB1O43683 1085 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 TMCC1O94876 653 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 LRIG2O94898 1065 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 RASGRP1O95267 797 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 GJB6O95452 261 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 IGSF6O95976 241 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 CTSEP14091 401 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 ELP6Q0PNE2 266 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 LRRC14Q15048 493 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 CDO1Q16878 200 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 KLHL40Q2TBA0 621 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 INO80DQ53TQ3 878 aaPredicted RBP19.27■□□□□ 0.68
GGPS1-206ENST00000488594 KLHDC7AQ5VTJ3 777 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 RAB11FIP2Q7L804 512 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 STRADAQ7RTN6 431 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 ATL2Q8NHH9 583 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 PCDH19Q8TAB3 1148 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 EPS8L1Q8TE68 723 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 TMEM74Q96NL1 305 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 EDEM3Q9BZQ6 932 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 EPB41L5Q9HCM4 733 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 NEU3Q9UQ49 428 aa19.27■□□□□ 0.68
GGPS1-206ENST00000488594 FAM170AA1A519 330 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 D6RAR5 112 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 WISP1O95388 367 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 MMEP08473 750 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 PLEKP08567 350 aaPredicted RBP19.26■□□□□ 0.67
GGPS1-206ENST00000488594 UCHL3P15374 230 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 XPAP23025 273 aaPredicted RBP19.26■□□□□ 0.67
GGPS1-206ENST00000488594 SLC5A2P31639 672 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 CCKBRP32239 447 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 UGT1A5P35504 534 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 INHBCP55103 352 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 C1QBPQ07021 282 aaKnown RBP19.26■□□□□ 0.67
GGPS1-206ENST00000488594 IRF4Q15306 451 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 CCDC14Q49A88 953 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 TMEM52BQ4KMG9 183 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 LRRC73Q5JTD7 316 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 MIIPQ5JXC2 388 aa19.26■□□□□ 0.67
GGPS1-206ENST00000488594 LEKR1Q6ZMV7 388 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms