RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 VPS36Q86VN1 386 aa23.38■■□□□ 1.33
CUL4A-209ENST00000488558 PARGQ86W56 976 aa23.38■■□□□ 1.33
CUL4A-209ENST00000488558 SLC39A8Q9C0K1 460 aa23.38■■□□□ 1.33
CUL4A-209ENST00000488558 FREM2Q5SZK8 3169 aa23.38■■□□□ 1.33
CUL4A-209ENST00000488558 SPTY2D1-AS1A0A0U1RR47 76 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 GOLGA6L19H0YKK7 550 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 DAPK3O43293 454 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 SERPING1P05155 500 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 ERCC2P18074 760 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 HNF1BP35680 557 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 PAPOLAP51003 745 aaKnown RBP23.37■■□□□ 1.33
CUL4A-209ENST00000488558 HNRNPKP61978 463 aaKnown RBP eCLIP23.37■■□□□ 1.33
CUL4A-209ENST00000488558 ZBED6P86452 979 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 FZD2Q14332 565 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 HS1BP3Q53T59 392 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 ARHGAP12Q8IWW6 846 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 CELF6Q96J87 481 aaKnown RBP23.37■■□□□ 1.33
CUL4A-209ENST00000488558 EXOC2Q96KP1 924 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 TUBGCP5Q96RT8 1024 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 C1QTNF7Q9BXJ2 289 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 MYO1AQ9UBC5 1043 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 DMXL2Q8TDJ6 3036 aa23.37■■□□□ 1.33
CUL4A-209ENST00000488558 ANKRD11Q6UB99 2663 aaPredicted RBP23.36■■□□□ 1.33
CUL4A-209ENST00000488558 J3KR12 359 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 TAF4O00268 1085 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 TRIM38O00635 465 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 TOR1BO14657 336 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 SIGLEC6O43699 453 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 NME1P15531 152 aaKnown RBP23.36■■□□□ 1.33
CUL4A-209ENST00000488558 CSNK1DP48730 415 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 PFN3P60673 137 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 ELP6Q0PNE2 266 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 DPYSQ14117 519 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 DPYSL2Q16555 572 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 PPP6R3Q5H9R7 873 aaPredicted RBP23.36■■□□□ 1.33
CUL4A-209ENST00000488558 LZTR1Q8N653 840 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 PDCD7Q8N8D1 485 aaKnown RBP23.36■■□□□ 1.33
CUL4A-209ENST00000488558 CXorf40AQ8TE69 158 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 CENPTQ96BT3 561 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 ZNF641Q96N77 438 aaPredicted RBP23.36■■□□□ 1.33
CUL4A-209ENST00000488558 ZWILCHQ9H900 591 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 UCKL1Q9NWZ5 548 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 DNAJC28Q9NX36 388 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 NLGN3Q9NZ94 848 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 CAPN11Q9UMQ6 739 aa23.36■■□□□ 1.33
CUL4A-209ENST00000488558 NEMP2A6NFY4 417 aa23.35■■□□□ 1.33
CUL4A-209ENST00000488558 H3BM21 787 aa23.35■■□□□ 1.33
CUL4A-209ENST00000488558 INSIG1O15503 277 aa23.35■■□□□ 1.33
CUL4A-209ENST00000488558 CSF2P04141 144 aa23.35■■□□□ 1.33
CUL4A-209ENST00000488558 GIMD1P0DJR0 217 aa23.35■■□□□ 1.33
CUL4A-209ENST00000488558 ALPPL2P10696 532 aa23.35■■□□□ 1.33
CUL4A-209ENST00000488558 TIMP2P16035 220 aa23.35■■□□□ 1.33
CUL4A-209ENST00000488558 PIGHQ14442 188 aaPredicted RBP23.35■■□□□ 1.33
CUL4A-209ENST00000488558 RFTN1Q14699 578 aaPredicted RBP23.35■■□□□ 1.33
CUL4A-209ENST00000488558 TMEM52BQ4KMG9 183 aa23.35■■□□□ 1.33
CUL4A-209ENST00000488558 BRAT1Q6PJG6 821 aa23.35■■□□□ 1.33
CUL4A-209ENST00000488558 NPWQ8N729 165 aa23.35■■□□□ 1.33
CUL4A-209ENST00000488558 NIPA2Q8N8Q9 360 aa23.35■■□□□ 1.33
CUL4A-209ENST00000488558 NETO2Q8NC67 525 aa23.35■■□□□ 1.33
CUL4A-209ENST00000488558 RFFLQ8WZ73 363 aa23.35■■□□□ 1.33
CUL4A-209ENST00000488558 CWC15Q9P013 229 aaKnown RBP23.35■■□□□ 1.33
CUL4A-209ENST00000488558 CFAP47Q6ZTR5 3102 aa23.35■■□□□ 1.33
CUL4A-209ENST00000488558 ANKRD36A6QL64 1941 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 FAM149AA5PLN7 773 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 H3BRJ5 948 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 TM7SF2O76062 418 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 PIGNO95427 931 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 YPEL5P62699 121 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 IL10RBQ08334 325 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 PDE1CQ14123 709 aaPredicted RBP23.34■■□□□ 1.33
CUL4A-209ENST00000488558 BOLA3Q53S33 107 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 LRRC73Q5JTD7 316 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 CACTIN-AS1Q8N1I8 211 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 DUSP23Q9BVJ7 150 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 SUV39H2Q9H5I1 410 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 SP110Q9HB58 689 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 USP29Q9HBJ7 922 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 CSNK1G3Q9Y6M4 447 aa23.34■■□□□ 1.33
CUL4A-209ENST00000488558 TDRD6O60522 2096 aaKnown RBP23.33■■□□□ 1.33
CUL4A-209ENST00000488558 TRABD2BA6NFA1 517 aa23.33■■□□□ 1.33
CUL4A-209ENST00000488558 RIOK3O14730 519 aaKnown RBP23.33■■□□□ 1.33
CUL4A-209ENST00000488558 SCAMP1O15126 338 aa23.33■■□□□ 1.33
CUL4A-209ENST00000488558 XPAP23025 273 aaPredicted RBP23.33■■□□□ 1.33
CUL4A-209ENST00000488558 IL1R2P27930 398 aa23.33■■□□□ 1.33
CUL4A-209ENST00000488558 IGFALSP35858 605 aa23.33■■□□□ 1.33
CUL4A-209ENST00000488558 NSUN2Q08J23 767 aaKnown RBP eCLIP23.33■■□□□ 1.33
CUL4A-209ENST00000488558 PTK2BQ14289 1009 aa23.33■■□□□ 1.33
CUL4A-209ENST00000488558 UGP2Q16851 508 aa23.33■■□□□ 1.33
CUL4A-209ENST00000488558 FAM181AQ8N9Y4 354 aa23.33■■□□□ 1.33
CUL4A-209ENST00000488558 MDM1Q8TC05 714 aa23.33■■□□□ 1.33
CUL4A-209ENST00000488558 ZNF599Q96NL3 588 aa23.33■■□□□ 1.33
CUL4A-209ENST00000488558 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.33■■□□□ 1.336e-7■□□□□ 9.3
CUL4A-209ENST00000488558 IPO11Q9UI26 975 aaKnown RBP23.33■■□□□ 1.33
CUL4A-209ENST00000488558 LUC7L2Q9Y383 392 aaKnown RBP23.33■■□□□ 1.33
CUL4A-209ENST00000488558 LRRK1Q38SD2 2015 aa23.33■■□□□ 1.32
CUL4A-209ENST00000488558 DFFAO00273 331 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 FFAR2O15552 330 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 MMP20O60882 483 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 PALMO75781 387 aa23.32■■□□□ 1.32
CUL4A-209ENST00000488558 GYPCP04921 128 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms