RNA–Protein interactions for RNA: ENST00000488311.1

PLD3-213, Transcript of phospholipase D family member 3, humanhuman

TSL 2

Gene PLD3, Length 750 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-213ENST00000488311 FNIP1Q8TF40 1166 aa12.44□□□□□ -0.42
PLD3-213ENST00000488311 WRAP53Q9BUR4 548 aaKnown RBP12.44□□□□□ -0.42
PLD3-213ENST00000488311 C1QTNF2Q9BXJ5 285 aa12.44□□□□□ -0.42
PLD3-213ENST00000488311 TCEAL2Q9H3H9 227 aaPredicted RBP12.44□□□□□ -0.42
PLD3-213ENST00000488311 MBNL1Q9NR56 388 aaKnown RBP12.44□□□□□ -0.42
PLD3-213ENST00000488311 IFNKQ9P0W0 207 aa12.44□□□□□ -0.42
PLD3-213ENST00000488311 UBA2Q9UBT2 640 aaPredicted RBP12.44□□□□□ -0.42
PLD3-213ENST00000488311 U3KQA8 63 aa12.44□□□□□ -0.42
PLD3-213ENST00000488311 ANKRD36A6QL64 1941 aa12.44□□□□□ -0.42
PLD3-213ENST00000488311 ZFYVE26Q68DK2 2539 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 TMEM8BA6NDV4 472 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 ZSCAN5CA6NGD5 496 aaPredicted RBP12.43□□□□□ -0.42
PLD3-213ENST00000488311 A6NNZ2 444 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 FGF10O15520 208 aaPredicted RBP12.43□□□□□ -0.42
PLD3-213ENST00000488311 IGSF6O95976 241 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 GEMIN4P57678 1058 aaKnown RBP12.43□□□□□ -0.42
PLD3-213ENST00000488311 INAVAQ3KP66 663 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 INO80DQ53TQ3 878 aaPredicted RBP12.43□□□□□ -0.42
PLD3-213ENST00000488311 KCTD16Q68DU8 428 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 KYAT3Q6YP21 454 aaKnown RBP12.43□□□□□ -0.42
PLD3-213ENST00000488311 PROSER1Q86XN7 944 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 RBFAQ8N0V3 343 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 OXR1Q8N573 874 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 FUBP1Q96AE4 644 aaKnown RBP12.43□□□□□ -0.42
PLD3-213ENST00000488311 CENPTQ96BT3 561 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 FEM1CQ96JP0 617 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 EDEM3Q9BZQ6 932 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 ZWILCHQ9H900 591 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 KLHL11Q9NVR0 708 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 DNAJC28Q9NX36 388 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 NENFQ9UMX5 172 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 MYLKQ15746 1914 aa12.43□□□□□ -0.42
PLD3-213ENST00000488311 ITPR1Q14643 2758 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 ANKRD11Q6UB99 2663 aaPredicted RBP12.42□□□□□ -0.42
PLD3-213ENST00000488311 A0A1W2PQJ5 194 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 TRABD2BA6NFA1 517 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 DFFAO00273 331 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 NEMP1O14524 444 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 YKT6O15498 198 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 TSPAN6O43657 245 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 PRPSAP2O60256 369 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 RFPL3O75679 317 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 PEX11BO96011 259 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 AMPD1P23109 780 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 NDST2P52849 883 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 PFN3P60673 137 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 SLC25A11Q02978 314 aaKnown RBP12.42□□□□□ -0.42
PLD3-213ENST00000488311 EIF2B5Q13144 721 aaKnown RBP12.42□□□□□ -0.42
PLD3-213ENST00000488311 PDE1CQ14123 709 aaPredicted RBP12.42□□□□□ -0.42
PLD3-213ENST00000488311 TTC7BQ86TV6 843 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 VPS36Q86VN1 386 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 CAMK1DQ8IU85 385 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 TP53I13Q8NBR0 393 aaPredicted RBP12.42□□□□□ -0.42
PLD3-213ENST00000488311 HSPH1Q92598 858 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 LRIG1Q96JA1 1093 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.42□□□□□ -0.42
PLD3-213ENST00000488311 OSBPL1AQ9BXW6 950 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 PACSIN1Q9BY11 444 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 XPO4Q9C0E2 1151 aaKnown RBP12.42□□□□□ -0.42
PLD3-213ENST00000488311 PCDH12Q9NPG4 1184 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 CAPN11Q9UMQ6 739 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 HS3ST3A1Q9Y663 406 aa12.42□□□□□ -0.42
PLD3-213ENST00000488311 COL27A1Q8IZC6 1860 aaPredicted RBP12.42□□□□□ -0.42
PLD3-213ENST00000488311 SPTY2D1-AS1A0A0U1RR47 76 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 TSPAN11A1L157 253 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 MAGEC1O60732 1142 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 RNF8O76064 485 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 CELA2BP08218 269 aaPredicted RBP12.41□□□□□ -0.42
PLD3-213ENST00000488311 CD48P09326 243 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 RARAP10276 462 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 CASP14P31944 242 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 CYP4F3Q08477 520 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 CCDC15Q0P6D6 951 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 MMRN1Q13201 1228 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 IRF4Q15306 451 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 TCEA2Q15560 299 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 DPYSL2Q16555 572 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 ATP13A4Q4VNC1 1196 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 FAM182AQ5T1J6 154 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 HES3Q5TGS1 186 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 POLNQ7Z5Q5 900 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 PGBD5Q8N414 524 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 ZNF548Q8NEK5 533 aaPredicted RBP12.41□□□□□ -0.42
PLD3-213ENST00000488311 OR4C6Q8NH72 309 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 CASKIN2Q8WXE0 1202 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 RAB7BQ96AH8 199 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 LENG8Q96PV6 779 aaPredicted RBP12.41□□□□□ -0.42
PLD3-213ENST00000488311 NUP85Q9BW27 656 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 SUV39H2Q9H5I1 410 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.41□□□□□ -0.42
PLD3-213ENST00000488311 DKK3Q9UBP4 350 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 RAXQ9Y2V3 346 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 PCDHGA1Q9Y5H4 931 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 SCINQ9Y6U3 715 aa12.41□□□□□ -0.42
PLD3-213ENST00000488311 ARHGAP42A6NI28 874 aa12.4□□□□□ -0.42
PLD3-213ENST00000488311 SCAMP1O15126 338 aa12.4□□□□□ -0.42
PLD3-213ENST00000488311 DAPK3O43293 454 aa12.4□□□□□ -0.42
PLD3-213ENST00000488311 GCATO75600 419 aa12.4□□□□□ -0.42
PLD3-213ENST00000488311 CSF2P04141 144 aa12.4□□□□□ -0.42
PLD3-213ENST00000488311 SERPING1P05155 500 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms