RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 HSPA12BQ96MM6 686 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 OSBPL1AQ9BXW6 950 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 BTBD1Q9H0C5 482 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 BRD8Q9H0E9 1235 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 IRF2BPLQ9H1B7 796 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 DUSP15Q9H1R2 295 aaPredicted RBP11.17□□□□□ -0.62
UBE4B-210ENST00000488228 ATP13A3Q9H7F0 1226 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 KCND1Q9NSA2 647 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 WSB2Q9NYS7 404 aaPredicted RBP11.17□□□□□ -0.62
UBE4B-210ENST00000488228 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.17□□□□□ -0.62
UBE4B-210ENST00000488228 GGT7Q9UJ14 662 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 DNPEPQ9ULA0 475 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 NCKAP1Q9Y2A7 1128 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 FAM186AA6NE01 2351 aa11.17□□□□□ -0.62
UBE4B-210ENST00000488228 TSPAN11A1L157 253 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 C16orf96A6NNT2 1141 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 KCNN4O15554 427 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 PLRG1O43660 514 aaKnown RBP11.16□□□□□ -0.62
UBE4B-210ENST00000488228 PRKCGP05129 697 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 ADRB3P13945 408 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 NFKB1P19838 968 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 OXTRP30559 389 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 CD86P42081 329 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 PTGER3P43115 390 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 MAPK8P45983 427 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 DHPSP49366 369 aaPredicted RBP11.16□□□□□ -0.62
UBE4B-210ENST00000488228 TAS2R38P59533 333 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 BCL2L1Q07817 233 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 NSUN2Q08J23 767 aaKnown RBP eCLIP11.16□□□□□ -0.62
UBE4B-210ENST00000488228 XRCC4Q13426 336 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 ELF2Q15723 593 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 CFAP58Q5T655 872 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 DARS2Q6PI48 645 aaKnown RBP11.16□□□□□ -0.62
UBE4B-210ENST00000488228 SLC36A4Q6YBV0 504 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 SLC41A1Q8IVJ1 513 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 ZNF567Q8N184 647 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 PAF1Q8N7H5 531 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 SUMF1Q8NBK3 374 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 TTC13Q8NBP0 860 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 OR14C36Q8NHC7 312 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 SLC35B2Q8TB61 432 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 ARRDC2Q8TBH0 407 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 PDCD6IPQ8WUM4 868 aaKnown RBP11.16□□□□□ -0.62
UBE4B-210ENST00000488228 UBE2Q2Q8WVN8 375 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 SNX19Q92543 992 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 LRIG1Q96JA1 1093 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 TUBGCP5Q96RT8 1024 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 OSBPL9Q96SU4 736 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 HDAC8Q9BY41 377 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 CPEB1Q9BZB8 566 aaKnown RBP11.16□□□□□ -0.62
UBE4B-210ENST00000488228 SGK2Q9HBY8 427 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 KLHL8Q9P2G9 620 aaPredicted RBP11.16□□□□□ -0.62
UBE4B-210ENST00000488228 SNX12Q9UMY4 172 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 ATP8A1Q9Y2Q0 1164 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 PCDHGC4Q9Y5F7 938 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 PCDH15Q96QU1 1955 aa11.16□□□□□ -0.62
UBE4B-210ENST00000488228 ZNF106Q9H2Y7 1883 aaKnown RBP11.15□□□□□ -0.62
UBE4B-210ENST00000488228 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.15□□□□□ -0.62
UBE4B-210ENST00000488228 MEI4A8MW99 385 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 UPK3BL1B0FP48 263 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 UPK3BL2E5RIL1 263 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 TRAFD1O14545 582 aaPredicted RBP11.15□□□□□ -0.62
UBE4B-210ENST00000488228 ZNF185O15231 689 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 SLC7A4O43246 635 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 LIASO43766 372 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 FSBPO95073 299 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 CPP00450 1065 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 MMP2P08253 660 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 ITIH2P19823 946 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 CD68P34810 354 aaPredicted RBP11.15□□□□□ -0.62
UBE4B-210ENST00000488228 GDF10P55107 478 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 SEMG2Q02383 582 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 SFSWAPQ12872 951 aaKnown RBP11.15□□□□□ -0.62
UBE4B-210ENST00000488228 SNX1Q13596 522 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 GRM3Q14832 879 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 LONRF2Q1L5Z9 754 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 FBXL19Q6PCT2 694 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 LPCAT2Q7L5N7 544 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 C11orf74Q86VG3 221 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 FAM71DQ8N9W8 422 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 TRIM44Q96DX7 344 aaPredicted RBP11.15□□□□□ -0.62
UBE4B-210ENST00000488228 TEKT5Q96M29 485 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 SMIM14Q96QK8 99 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 RBM15Q96T37 977 aaKnown RBP eCLIP11.15□□□□□ -0.62
UBE4B-210ENST00000488228 NAPGQ99747 312 aaPredicted RBP11.15□□□□□ -0.62
UBE4B-210ENST00000488228 SUV39H2Q9H5I1 410 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 GLOD4Q9HC38 313 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 AMACRQ9UHK6 382 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 RAB23Q9ULC3 237 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 ZKSCAN5Q9Y2L8 839 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 RAI2Q9Y5P3 530 aa11.15□□□□□ -0.62
UBE4B-210ENST00000488228 BCLAF3A2AJT9 711 aaKnown RBP11.14□□□□□ -0.63
UBE4B-210ENST00000488228 LRRC72A6NJI9 287 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 PGRMC1O00264 195 aaKnown RBP11.14□□□□□ -0.63
UBE4B-210ENST00000488228 MTSS1O43312 755 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 SOCS5O75159 536 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 IGHV4-34P06331 123 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 TIMP2P16035 220 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 ITPKAP23677 461 aa11.14□□□□□ -0.63
UBE4B-210ENST00000488228 MAT2AP31153 395 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms