RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 KLQ9UEF7 1012 aa3.25□□□□□ -1.89
SMC4-220ENST00000488017 TARSL2A2RTX5 802 aaKnown RBP3.24□□□□□ -1.89
SMC4-220ENST00000488017 ASPDHA6ND91 283 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 CAPN9O14815 690 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 PIP5K1BO14986 540 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 SYN3O14994 580 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 HNRNPRO43390 633 aaKnown RBP3.24□□□□□ -1.89
SMC4-220ENST00000488017 DRG2P55039 364 aaKnown RBP3.24□□□□□ -1.89
SMC4-220ENST00000488017 DSCR10P59022 87 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 BTBD16Q32M84 506 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 SPINK14Q6IE38 97 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 RINLQ6ZS11 566 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 GATAD2AQ86YP4 633 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 DENND6AQ8IWF6 608 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 BRSK2Q8IWQ3 736 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 ZMIZ2Q8NF64 920 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 TTC8Q8TAM2 541 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 CSF3RQ99062 836 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 TBCBQ99426 244 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 SLC9A2Q9UBY0 812 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 TCEAL9Q9UHQ7 104 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 RNF215Q9Y6U7 377 aa3.24□□□□□ -1.89
SMC4-220ENST00000488017 MID1O15344 667 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 HSPA12AO43301 675 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 NCK2O43639 380 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 STRNO43815 780 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 TNFSF4P23510 183 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 FMO5P49326 533 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 CSRP3P50461 194 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 LUMP51884 338 aaPredicted RBP3.23□□□□□ -1.89
SMC4-220ENST00000488017 KRTAP12-2P59991 146 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 GRIK2Q13002 908 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 MPEG1Q2M385 716 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 AMZ1Q400G9 498 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 ATP13A5Q4VNC0 1218 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 SHFQ7M4L6 423 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 SFTPA2Q8IWL1 248 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 PJA1Q8NG27 643 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 SPATA22Q8NHS9 363 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 CREB3L4Q8TEY5 395 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 TIFAQ96CG3 184 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 ATOH8Q96SQ7 321 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 ASCL2Q99929 193 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 STK33Q9BYT3 514 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 UBXN6Q9BZV1 441 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 TMEM160Q9NX00 188 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 ANKRD10Q9NXR5 420 aa3.23□□□□□ -1.89
SMC4-220ENST00000488017 OR6C68A6NDL8 312 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 KRTAP16-1A8MUX0 517 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 PLA2G6O60733 806 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 RFPL2O75678 378 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 LYL1P12980 280 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 CTPS1P17812 591 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 HSPA7P48741 367 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 CENPAP49450 140 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 IRX6P78412 446 aaPredicted RBP3.22□□□□□ -1.89
SMC4-220ENST00000488017 CAPSQ13938 189 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 PLEKHG6Q3KR16 790 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 LCTLQ6UWM7 567 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 ZC3HC1Q86WB0 502 aaKnown RBP3.22□□□□□ -1.89
SMC4-220ENST00000488017 RNF183Q96D59 192 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 CXorf56Q9H5V9 222 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 ACAD9Q9H845 621 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 OGFRQ9NZT2 677 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 SLC39A10Q9ULF5 831 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 KCNK7Q9Y2U2 307 aa3.22□□□□□ -1.89
SMC4-220ENST00000488017 ATXN2Q99700 1313 aaKnown RBP3.21□□□□□ -1.89
SMC4-220ENST00000488017 C17orf100A8MU93 164 aa3.21□□□□□ -1.9
SMC4-220ENST00000488017 CDH1P12830 882 aa3.21□□□□□ -1.9
SMC4-220ENST00000488017 PAX1P15863 534 aa3.21□□□□□ -1.9
SMC4-220ENST00000488017 AVPR2P30518 371 aa3.21□□□□□ -1.9
SMC4-220ENST00000488017 KRT9P35527 623 aa3.21□□□□□ -1.9
SMC4-220ENST00000488017 DCTN1Q14203 1278 aa3.21□□□□□ -1.9
SMC4-220ENST00000488017 IRAK1BP1Q5VVH5 260 aa3.21□□□□□ -1.9
SMC4-220ENST00000488017 CCNI2Q6ZMN8 369 aaPredicted RBP3.21□□□□□ -1.9
SMC4-220ENST00000488017 SRBD1Q8N5C6 995 aaKnown RBP3.21□□□□□ -1.9
SMC4-220ENST00000488017 SLC24A4Q8NFF2 622 aa3.21□□□□□ -1.9
SMC4-220ENST00000488017 ARRDC2Q8TBH0 407 aa3.21□□□□□ -1.9
SMC4-220ENST00000488017 ALG14Q96F25 216 aa3.21□□□□□ -1.9
SMC4-220ENST00000488017 NOX4Q9NPH5 578 aa3.21□□□□□ -1.9
SMC4-220ENST00000488017 FNIP2Q9P278 1114 aa3.21□□□□□ -1.9
SMC4-220ENST00000488017 KCNS2Q9ULS6 477 aa3.21□□□□□ -1.9
SMC4-220ENST00000488017 ASNA1O43681 348 aa3.2□□□□□ -1.9
SMC4-220ENST00000488017 PCDH7O60245 1069 aa3.2□□□□□ -1.9
SMC4-220ENST00000488017 CBX6O95503 412 aa3.2□□□□□ -1.9
SMC4-220ENST00000488017 IL1AP01583 271 aa3.2□□□□□ -1.9
SMC4-220ENST00000488017 S100BP04271 92 aaPredicted RBP3.2□□□□□ -1.9
SMC4-220ENST00000488017 WEE2P0C1S8 567 aa3.2□□□□□ -1.9
SMC4-220ENST00000488017 KRTAP10-1P60331 282 aa3.2□□□□□ -1.9
SMC4-220ENST00000488017 ATPAF1Q5TC12 328 aaPredicted RBP3.2□□□□□ -1.9
SMC4-220ENST00000488017 IZUMO3Q5VZ72 239 aa3.2□□□□□ -1.9
SMC4-220ENST00000488017 SLC35E4Q6ICL7 350 aa3.2□□□□□ -1.9
SMC4-220ENST00000488017 NFRKBQ6P4R8 1299 aa3.2□□□□□ -1.9
SMC4-220ENST00000488017 C14orf80Q86SX3 495 aa3.2□□□□□ -1.9
SMC4-220ENST00000488017 MON1AQ86VX9 555 aa3.2□□□□□ -1.9
SMC4-220ENST00000488017 PTGR2Q8N8N7 351 aaPredicted RBP3.2□□□□□ -1.9
SMC4-220ENST00000488017 OR10V1Q8NGI7 309 aa3.2□□□□□ -1.9
SMC4-220ENST00000488017 OTULINQ96BN8 352 aa3.2□□□□□ -1.9
SMC4-220ENST00000488017 ZNF524Q96C55 264 aa3.2□□□□□ -1.9
SMC4-220ENST00000488017 ATP8A2Q9NTI2 1148 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms