RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 RNF146Q9NTX7 359 aa6.04□□□□□ -1.44
CUL3-211ENST00000487558 SPATS2LQ9NUQ6 558 aaKnown RBP6.04□□□□□ -1.44
CUL3-211ENST00000487558 ZNHIT2Q9UHR6 403 aa6.04□□□□□ -1.44
CUL3-211ENST00000487558 PCDHGB4Q9UN71 923 aa6.04□□□□□ -1.44
CUL3-211ENST00000487558 CARD8Q9Y2G2 431 aa6.04□□□□□ -1.44
CUL3-211ENST00000487558 TRBV5-7A0A0A0MS05 114 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 CBY3A6NI87 242 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 F8W810 466 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 WNT1P04628 370 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 LMO1P25800 156 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 CDAP32320 146 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 PIP4K2AP48426 406 aaPredicted RBP6.03□□□□□ -1.44
CUL3-211ENST00000487558 CALD1Q05682 793 aaKnown RBP6.03□□□□□ -1.44
CUL3-211ENST00000487558 STK4Q13043 487 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 FAM83HQ6ZRV2 1179 aaPredicted RBP6.03□□□□□ -1.44
CUL3-211ENST00000487558 TICAM1Q8IUC6 712 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.03□□□□□ -1.44
CUL3-211ENST00000487558 DDIASQ8IXT1 998 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 CADM3Q8N126 398 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 SLC25A41Q8N5S1 370 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 CMASQ8NFW8 434 aaPredicted RBP6.03□□□□□ -1.44
CUL3-211ENST00000487558 RASSF8Q8NHQ8 419 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 ATOH1Q92858 354 aaPredicted RBP6.03□□□□□ -1.44
CUL3-211ENST00000487558 ZNF419Q96HQ0 510 aaPredicted RBP6.03□□□□□ -1.44
CUL3-211ENST00000487558 WDFY2Q96P53 400 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 BBS4Q96RK4 519 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 FAM118BQ9BPY3 351 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 SCNM1Q9BWG6 230 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 NUF2Q9BZD4 464 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 POLR1BQ9H9Y6 1135 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 PTGFRNQ9P2B2 879 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 CTNNAL1Q9UBT7 734 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 SLC4A4Q9Y6R1 1079 aa6.03□□□□□ -1.44
CUL3-211ENST00000487558 KIR2DS5A0A0G2JLQ3 304 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 DDTLA6NHG4 134 aaPredicted RBP6.02□□□□□ -1.45
CUL3-211ENST00000487558 LINC01548A6NM66 108 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 KIR2DS3K7RE56 304 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 SNAP23O00161 211 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 SEC14L5O43304 696 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 C1QL1O75973 258 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 MT-CYBP00156 380 aaPredicted RBP6.02□□□□□ -1.45
CUL3-211ENST00000487558 KRT10P13645 584 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 MCM3P25205 808 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 ACSL1P33121 698 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 RFC1P35251 1148 aaPredicted RBP6.02□□□□□ -1.45
CUL3-211ENST00000487558 CDH8P55286 799 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 HDAC4P56524 1084 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 RPS13P62277 151 aaKnown RBP6.02□□□□□ -1.45
CUL3-211ENST00000487558 MRPS21P82921 87 aaKnown RBP6.02□□□□□ -1.45
CUL3-211ENST00000487558 GHRHRQ02643 423 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 STRIP1Q5VSL9 837 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 CHST9Q7L1S5 443 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 SERPINA11Q86U17 422 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 TRIM74Q86UV6 250 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 TRIM73Q86UV7 250 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 LURAP1LQ8IV03 231 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 HASPINQ8TF76 798 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 RNF183Q96D59 192 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 MMABQ96EY8 250 aaPredicted RBP6.02□□□□□ -1.45
CUL3-211ENST00000487558 PGAM5Q96HS1 289 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 ZNF333Q96JL9 665 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 SIN3AQ96ST3 1273 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 MXD3Q9BW11 206 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 PLEKHA4Q9H4M7 779 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 WDR6Q9NNW5 1121 aaKnown RBP6.02□□□□□ -1.45
CUL3-211ENST00000487558 SLC6A13Q9NSD5 602 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 SEL1LQ9UBV2 794 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 AAR2Q9Y312 384 aaKnown RBP6.02□□□□□ -1.45
CUL3-211ENST00000487558 RAP2CQ9Y3L5 183 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 SESN1Q9Y6P5 492 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 KAT6AQ92794 2004 aa6.02□□□□□ -1.45
CUL3-211ENST00000487558 A0A1W2PQF6 199 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 LRRC3CA6NJW4 275 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 SCAMP1O15126 338 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 P4HA2O15460 535 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 BEST1O76090 585 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 OR2C1O95371 312 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 CLTBP09497 229 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 UNGP13051 313 aaPredicted RBP6.01□□□□□ -1.45
CUL3-211ENST00000487558 GCH1P30793 250 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 RYKP34925 604 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 UBA7P41226 1012 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 GARSP41250 739 aaKnown RBP6.01□□□□□ -1.45
CUL3-211ENST00000487558 PTH2RP49190 550 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 CFHR1Q03591 330 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 CEBPZQ03701 1054 aaKnown RBP6.01□□□□□ -1.45
CUL3-211ENST00000487558 SLC10A2Q12908 348 aaPredicted RBP6.01□□□□□ -1.45
CUL3-211ENST00000487558 BECN1Q14457 450 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 MIDNQ504T8 468 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 ENTPD8Q5MY95 495 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 PTF1AQ7RTS3 328 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 KRT74Q7RTS7 529 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 ADGRG3Q86Y34 549 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 DHX40Q8IX18 779 aaKnown RBP6.01□□□□□ -1.45
CUL3-211ENST00000487558 TEX11Q8IYF3 940 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 ZCCHC9Q8N567 271 aaKnown RBP6.01□□□□□ -1.45
CUL3-211ENST00000487558 BOLLQ8N9W6 283 aaKnown RBP6.01□□□□□ -1.45
CUL3-211ENST00000487558 SGCDQ92629 289 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 NELL1Q92832 810 aa6.01□□□□□ -1.45
CUL3-211ENST00000487558 ZC3HAV1LQ96H79 300 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms