RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 FCRL5Q96RD9 977 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 TMEM121Q9BTD3 319 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 NEUROG2Q9H2A3 272 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 SGK2Q9HBY8 427 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 CD93Q9NPY3 652 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 DYRK4Q9NR20 520 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 WSB2Q9NYS7 404 aaPredicted RBP19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 CYP8B1Q9UNU6 501 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 ZNF148Q9UQR1 794 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 TTLL3Q9Y4R7 772 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 ANKRD36A6QL64 1941 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 C16orf96A6NNT2 1141 aa19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 H0Y858 1186 aa19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 OPHN1O60890 802 aa19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 RNASEH2AO75792 299 aaKnown RBP19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 PIGNO95427 931 aa19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 MMP2P08253 660 aa19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 SERPINF2P08697 491 aa19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 CNTN1Q12860 1018 aa19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 ITPRIPL1Q6GPH6 555 aa19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 BRAT1Q6PJG6 821 aa19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 ERN2Q76MJ5 926 aaKnown RBP19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 SPATA13Q96N96 652 aa19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 BTBD1Q9H0C5 482 aa19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 SERGEFQ9UGK8 458 aa19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 FANCMQ8IYD8 2048 aa19.57■□□□□ 0.72
PCOLCE-208ENST00000487172 GOLGA6L10A0A0M3HER8 536 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 HRO43593 1189 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 NFKB1P19838 968 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 CD6P30203 668 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 PAFAH1B1P43034 410 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 SUOXP51687 545 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 NEK3P51956 506 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 PTPN5P54829 565 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 GDF10P55107 478 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 SKOR1P84550 965 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 SNX1Q13596 522 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 IHHQ14623 411 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 P3H1Q32P28 736 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 PIP5KL1Q5T9C9 394 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 AGBL4Q5VU57 503 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 SLC36A4Q6YBV0 504 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 PRPF39Q86UA1 669 aaKnown RBP19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 RLN3Q8WXF3 142 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 RAB7BQ96AH8 199 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 AP1M1Q9BXS5 423 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 KDM4CQ9H3R0 1056 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 SMARCAL1Q9NZC9 954 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 PCDHGC4Q9Y5F7 938 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 RAI2Q9Y5P3 530 aa19.56■□□□□ 0.72
PCOLCE-208ENST00000487172 FZD6O60353 706 aa19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 RPP40O75818 363 aaKnown RBP19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 CD86P42081 329 aa19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 POLR2LP62875 67 aaKnown RBP19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 TRAF2Q12933 501 aa19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 POM121L1PQ3SYA9 428 aa19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 SPDYCQ5MJ68 293 aa19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 FAM182AQ5T1J6 154 aa19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 ZC3H14Q6PJT7 736 aaKnown RBP19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 PARS2Q7L3T8 475 aaKnown RBP19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 FRMD1Q8N878 549 aa19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 FAM71DQ8N9W8 422 aa19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 ATL2Q8NHH9 583 aa19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 CCDC110Q8TBZ0 833 aa19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 GANCQ8TET4 914 aa19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 MAGOHBQ96A72 148 aaKnown RBP19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 TOE1Q96GM8 510 aaKnown RBP19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 CAPZA3Q96KX2 299 aa19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 GBA3Q9H227 469 aa19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 VPS45Q9NRW7 570 aa19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 MBD1Q9UIS9 605 aaPredicted RBP19.55■□□□□ 0.72
PCOLCE-208ENST00000487172 C10orf142B7Z368 130 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 PLRG1O43660 514 aaKnown RBP19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 AP1G1O43747 822 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 PHF2O75151 1096 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 PGLSO95336 258 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 ADRB3P13945 408 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 TIMP2P16035 220 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 CA4P22748 312 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 ACSL1P33121 698 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 LMNB2Q03252 620 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 UGP2Q16851 508 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 CFAP58Q5T655 872 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 ARMC12Q5T9G4 340 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 FBXL19Q6PCT2 694 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 KLHDC8BQ8IXV7 354 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 FAM160A2Q8N612 972 aaPredicted RBP19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 PPP1R2P1Q96PQ5 205 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 RBM15Q96T37 977 aaKnown RBP eCLIP19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 TDRD1Q9BXT4 1180 aaKnown RBP19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 PCED1AQ9H1Q7 454 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 RSPH14Q9UHP6 348 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 FEZ2Q9UHY8 353 aaPredicted RBP19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 PHTF1Q9UMS5 762 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 PPIL1Q9Y3C6 166 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 HCN4Q9Y3Q4 1203 aa19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 ARIH1Q9Y4X5 557 aaPredicted RBP19.54■□□□□ 0.72
PCOLCE-208ENST00000487172 PDE2AO00408 941 aaPredicted RBP19.53■□□□□ 0.72
PCOLCE-208ENST00000487172 PLK4O00444 970 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms