RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TMEM176AQ96HP8 235 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 HEXIM2Q96MH2 286 aaKnown RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 ZMAT2Q96NC0 199 aaKnown RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 OMDQ99983 421 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 BCO2Q9BYV7 579 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 EIF2B3Q9NR50 452 aaKnown RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 SMPD3Q9NY59 655 aaPredicted RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 EGFL7Q9UHF1 273 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 MAGED2Q9UNF1 606 aaPredicted RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 SNX9Q9Y5X1 595 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 SRCAPQ6ZRS2 3230 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 SIP14410 1827 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 ZCWPW2A0A1B0GU75 182 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 TARM1B6A8C7 271 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 POLRMTO00411 1230 aaKnown RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 UBDO15205 165 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 USP12O75317 370 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 GMNNO75496 209 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 TOMM70O94826 608 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 ALOX5P09917 674 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 NCAM1P13591 858 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 HNRNPLP14866 589 aaKnown RBP eCLIP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 KCNA2P16389 499 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 CYP3A5P20815 502 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 OXTRP30559 389 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 RGS7P49802 495 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 CSE1LP55060 971 aaKnown RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 IFITM2Q01629 132 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 TUBA3CQ13748 450 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 SQLEQ14534 574 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 GRM3Q14832 879 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 NDUFA5Q16718 116 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 NCBP2-AS2Q69YL0 99 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 USP51Q70EK9 711 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 DDIASQ8IXT1 998 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 Q8N9G6 341 aaPredicted RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 OR9I1Q8NGQ6 314 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 CXorf38Q8TB03 319 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 PNPT1Q8TCS8 783 aaKnown RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 HDAC10Q969S8 669 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 MFSD3Q96ES6 412 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 VPS39Q96JC1 886 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 PRMT6Q96LA8 375 aaPredicted RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 TBCBQ99426 244 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 SCUBE2Q9NQ36 999 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 TBC1D13Q9NVG8 400 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 GTSE1Q9NYZ3 720 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 TLK1Q9UKI8 766 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 IFT52Q9Y366 437 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 LRRC37AA6NMS7 1700 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 RNF103O00237 685 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 MSI1O43347 362 aaKnown RBP10.73□□□□□ -0.69
CCDC171-208ENST00000486641 TIMM44O43615 452 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 BCAS1O75363 584 aaPredicted RBP10.73□□□□□ -0.69
CCDC171-208ENST00000486641 UGT2B4P06133 528 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 SDC4P31431 198 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 LEPRP48357 1165 aaKnown RBP10.73□□□□□ -0.69
CCDC171-208ENST00000486641 CSRP3P50461 194 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 HNRNPFP52597 415 aaKnown RBP10.73□□□□□ -0.69
CCDC171-208ENST00000486641 PLA2G16P53816 162 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 ACTR2P61160 394 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 OSTNP61366 133 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 ADARB1P78563 741 aaKnown RBP10.73□□□□□ -0.69
CCDC171-208ENST00000486641 OCA2Q04671 838 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 XKR3Q5GH77 459 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 ZNF667Q5HYK9 610 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 TMTC4Q5T4D3 741 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 TSTD2Q5T7W7 516 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 FAM219BQ5XKK7 198 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 ABHD15Q6UXT9 468 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 CYP2U1Q7Z449 544 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 SPATA6LQ8N4H0 392 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 MINDY2Q8NBR6 621 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 KHSRPQ92945 711 aaKnown RBP eCLIP10.73□□□□□ -0.69
CCDC171-208ENST00000486641 SLC45A3Q96JT2 553 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 CSPG4P5Q96PW8 444 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 MCMBPQ9BTE3 642 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 BEGAINQ9BUH8 593 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 TMEM134Q9H6X4 195 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 LRRC40Q9H9A6 602 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 IL1RL2Q9HB29 575 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 GBA2Q9HCG7 927 aaPredicted RBP10.73□□□□□ -0.69
CCDC171-208ENST00000486641 HMG20AQ9NP66 347 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 AKIP1Q9NQ31 210 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 IARS2Q9NSE4 1012 aaKnown RBP10.73□□□□□ -0.69
CCDC171-208ENST00000486641 SEPT10Q9P0V9 454 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 AQP12BA6NM10 295 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 TCP10L2B9ZVM9 353 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.73□□□□□ -0.69
CCDC171-208ENST00000486641 PSMD11O00231 422 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 NME4O00746 187 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 DPYSL4O14531 572 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 TOR1BO14657 336 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 CILPO75339 1184 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 ZBTB7AO95365 584 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 TNNC2P02585 160 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 C7P10643 843 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 AXLP30530 894 aa10.73□□□□□ -0.69
CCDC171-208ENST00000486641 RPS9P46781 194 aaKnown RBP10.73□□□□□ -0.69
CCDC171-208ENST00000486641 C1QTNF8P60827 252 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms