RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 RPP40O75818 363 aaKnown RBP11.51□□□□□ -0.57
NUP50-216ENST00000486184 IFNB1P01574 187 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 ITGAVP06756 1048 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 GOLGA6DP0CG33 693 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 TDGF1P13385 188 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 NFKB1P19838 968 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 CNR2P34972 360 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 DEKP35659 375 aaKnown RBP11.51□□□□□ -0.57
NUP50-216ENST00000486184 CD86P42081 329 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 NEK3P51956 506 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 POLR2LP62875 67 aaKnown RBP11.51□□□□□ -0.57
NUP50-216ENST00000486184 WASHC5Q12768 1159 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 PRPSAP1Q14558 356 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 SIX1Q15475 284 aaPredicted RBP11.51□□□□□ -0.57
NUP50-216ENST00000486184 ANKRD20A2Q5SQ80 823 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 ANKRD20A1Q5TYW2 823 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 ANKRD20A3Q5VUR7 823 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 ALG1LQ6GMV1 187 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 NCEH1Q6PIU2 408 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 BRAT1Q6PJG6 821 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.51□□□□□ -0.57
NUP50-216ENST00000486184 SLC36A4Q6YBV0 504 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 ERN2Q76MJ5 926 aaKnown RBP11.51□□□□□ -0.57
NUP50-216ENST00000486184 CAMK1DQ8IU85 385 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 NDUFAF2Q8N183 169 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 ZNF567Q8N184 647 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 FAM71DQ8N9W8 422 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 RLN3Q8WXF3 142 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 MAGOHBQ96A72 148 aaKnown RBP11.51□□□□□ -0.57
NUP50-216ENST00000486184 SPATA13Q96N96 652 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 PPP1R2P1Q96PQ5 205 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 BTBD1Q9H0C5 482 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 SLC25A51Q9H1U9 297 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 KCNH6Q9H252 994 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 SUV39H2Q9H5I1 410 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 NOD2Q9HC29 1040 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 GLOD4Q9HC38 313 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 GOLGA6AQ9NYA3 693 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 SMARCAL1Q9NZC9 954 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 USP36Q9P275 1121 aaKnown RBP11.51□□□□□ -0.57
NUP50-216ENST00000486184 SARDHQ9UL12 918 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 FZD4Q9ULV1 537 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 BOLA1Q9Y3E2 137 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 SPAG17Q6Q759 2223 aa11.51□□□□□ -0.57
NUP50-216ENST00000486184 LRRC72A6NJI9 287 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 C16orf96A6NNT2 1141 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 H0Y858 1186 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 NEMP1O14524 444 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 SLC7A4O43246 635 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 PHF2O75151 1096 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 GJB3O75712 270 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 ANXA9O76027 345 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 URI1O94763 535 aaPredicted RBP11.5□□□□□ -0.57
NUP50-216ENST00000486184 CPP00450 1065 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 CR2P20023 1033 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 CD6P30203 668 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 P2RY2P41231 377 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 EPHB1P54762 984 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 PTPN5P54829 565 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 CKAP4Q07065 602 aaKnown RBP11.5□□□□□ -0.57
NUP50-216ENST00000486184 CNTN1Q12860 1018 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 OASLQ15646 514 aaKnown RBP11.5□□□□□ -0.57
NUP50-216ENST00000486184 P3H1Q32P28 736 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 ARMC12Q5T9G4 340 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 CCDC70Q6NSX1 233 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 ERAP2Q6P179 960 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 DRICH1Q6PGQ1 229 aaPredicted RBP11.5□□□□□ -0.57
NUP50-216ENST00000486184 AADATQ8N5Z0 425 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 CNTD1Q8N815 330 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 PRELID2Q8N945 189 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 OR14C36Q8NHC7 312 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 KIF18AQ8NI77 898 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 CCDC110Q8TBZ0 833 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 HCAR2Q8TDS4 363 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 GRK7Q8WTQ7 553 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 GAB3Q8WWW8 586 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 ARRDC3Q96B67 414 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 IFT43Q96FT9 208 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 ZNF419Q96HQ0 510 aaPredicted RBP11.5□□□□□ -0.57
NUP50-216ENST00000486184 RBM15Q96T37 977 aaKnown RBP eCLIP11.5□□□□□ -0.57
NUP50-216ENST00000486184 HDAC8Q9BY41 377 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 GBA3Q9H227 469 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 SGK2Q9HBY8 427 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 FEZ2Q9UHY8 353 aaPredicted RBP11.5□□□□□ -0.57
NUP50-216ENST00000486184 INVSQ9Y283 1065 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 DRG1Q9Y295 367 aaKnown RBP11.5□□□□□ -0.57
NUP50-216ENST00000486184 PCDHGC4Q9Y5F7 938 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 RAI2Q9Y5P3 530 aa11.5□□□□□ -0.57
NUP50-216ENST00000486184 IGHV1OR15-9A0A0B4J2B8 117 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 C5orf60A6NFR6 353 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 FAM47DPA6NHR8 397 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 F5H423 210 aaPredicted RBP11.49□□□□□ -0.57
NUP50-216ENST00000486184 CCDC188H7C350 402 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 PLK4O00444 970 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 GAS8O95995 478 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 IGLV3-19P01714 112 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 ADRB3P13945 408 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 DRD3P35462 400 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 SUOXP51687 545 aa11.49□□□□□ -0.57
NUP50-216ENST00000486184 METAP1P53582 386 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms