RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 FEM1CQ96JP0 617 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 BMFQ96LC9 184 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 SELENOOQ9BVL4 669 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 SLC17A9Q9BYT1 436 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 CEP44Q9C0F1 390 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 THSD1Q9NS62 852 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 KLHL11Q9NVR0 708 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 SATB2Q9UPW6 733 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 FADS3Q9Y5Q0 445 aa10.75□□□□□ -0.69
HMGN1-215ENST00000485550 USP9XQ93008 2570 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-215ENST00000485550 FLNCQ14315 2725 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 ZFC3H1O60293 1989 aaKnown RBP10.74□□□□□ -0.69
HMGN1-215ENST00000485550 POM121BA6NF01 834 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 KRIT1O00522 736 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 NEMP1O14524 444 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 PLEKP08567 350 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-215ENST00000485550 RHOQP17081 205 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 GPD1P21695 349 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 ABL2P42684 1182 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 PTPN9P43378 593 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 MAPKAPK2P49137 400 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 UBXN1Q04323 297 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 CLEC16AQ2KHT3 1053 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 TMEM259Q4ZIN3 620 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 ATXN7L2Q5T6C5 722 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-215ENST00000485550 MANEALQ5VSG8 457 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 FOXR1Q6PIV2 292 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 SASS6Q6UVJ0 657 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 TRIM72Q6ZMU5 477 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 STRADAQ7RTN6 431 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 PTAR1Q7Z6K3 402 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-215ENST00000485550 SLC22A18ASQ8N1D0 253 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 OR4C6Q8NH72 309 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 CENPIQ92674 756 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-215ENST00000485550 TBC1D31Q96DN5 1066 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 TMEM248Q9NWD8 314 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 DNAJC28Q9NX36 388 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 GGT7Q9UJ14 662 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 HPCAL4Q9UM19 191 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 ITM2BQ9Y287 266 aa10.74□□□□□ -0.69
HMGN1-215ENST00000485550 A0A1W2PNU3 283 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-215ENST00000485550 PMS2P1A4D2B8 440 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 IGLON5A6NGN9 336 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 C16orf96A6NNT2 1141 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 TERTO14746 1132 aaKnown RBP10.73□□□□□ -0.69
HMGN1-215ENST00000485550 BUB1O43683 1085 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 CREB3O43889 395 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 RAMP2O60895 175 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 PIAS2O75928 621 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 NEBLO76041 1014 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 UGT2B4P06133 528 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 CKMT1AP12532 417 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 ITIH2P19823 946 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 ITGB7P26010 798 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 RBMS1P29558 406 aaKnown RBP10.73□□□□□ -0.69
HMGN1-215ENST00000485550 ANP32AP39687 249 aaKnown RBP10.73□□□□□ -0.69
HMGN1-215ENST00000485550 RPS21P63220 83 aaKnown RBP10.73□□□□□ -0.69
HMGN1-215ENST00000485550 MYL5Q02045 173 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 NRG1Q02297 640 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-215ENST00000485550 SGCGQ13326 291 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 POLD3Q15054 466 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-215ENST00000485550 MYLK3Q32MK0 819 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 LRRC73Q5JTD7 316 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 CLEC17AQ6ZS10 378 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 RBM43Q6ZSC3 357 aaKnown RBP10.73□□□□□ -0.69
HMGN1-215ENST00000485550 ABI3BPQ7Z7G0 1075 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 SLFN11Q7Z7L1 901 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 ANKRD20A12PQ8NF67 263 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 OR2AP1Q8NGE2 309 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 APOLD1Q96LR9 279 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 KLHL32Q96NJ5 620 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 AGPAT1Q99943 283 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 KLC2Q9H0B6 622 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 ABCG4Q9H172 646 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 MAGEH1Q9H213 219 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 ANO10Q9NW15 660 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 LIMA1Q9UHB6 759 aaKnown RBP10.73□□□□□ -0.69
HMGN1-215ENST00000485550 IPO11Q9UI26 975 aaKnown RBP10.73□□□□□ -0.69
HMGN1-215ENST00000485550 NEU3Q9UQ49 428 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 HS3ST3A1Q9Y663 406 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 TEX15Q9BXT5 2789 aa10.73□□□□□ -0.69
HMGN1-215ENST00000485550 LY6G6EA0A0G2JKS1 128 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 SIGLEC16A6NMB1 481 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 A6NNZ2 444 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 LGALS16A8MUM7 142 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 FPGTO14772 594 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 CCP110O43303 1012 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 KDELR3O43731 214 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 CALB1P05937 261 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 GIMD1P0DJR0 217 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 TGM2P21980 687 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 EPHB2P29323 1055 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 ETFBP38117 255 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 SNRPD1P62314 119 aaKnown RBP10.72□□□□□ -0.69
HMGN1-215ENST00000485550 RPL7AP62424 266 aaKnown RBP10.72□□□□□ -0.69
HMGN1-215ENST00000485550 SKOR1P84550 965 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 FZD2Q14332 565 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 ISXQ2M1V0 245 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 LINC00303Q3SY05 128 aa10.72□□□□□ -0.69
HMGN1-215ENST00000485550 ZNF805Q5CZA5 627 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms