RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	MCEE	Q96PE7	176 aa		13.44	□□□□□ -0.26
UBA3-210	ENST00000485424	AGPAT1	Q99943	283 aa		13.44	□□□□□ -0.26
UBA3-210	ENST00000485424	LIMA1	Q9UHB6	759 aa	Known RBP	13.44	□□□□□ -0.26
UBA3-210	ENST00000485424	AHCTF1	Q8WYP5	2266 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	LY6G6E	A0A0G2JKS1	128 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	TEX51	A0A1B0GUA7	166 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	POM121B	A6NF01	834 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	FAM72C	H0Y354	149 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	TM7SF2	O76062	418 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	TMCC1	O94876	653 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	FER	P16591	822 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	TNFAIP3	P21580	790 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	YBEY	P58557	167 aa	Predicted RBP	13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	MYLK3	Q32MK0	819 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	FAM72A	Q5TYM5	149 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	FAM72D	Q6L9T8	149 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	RBM43	Q6ZSC3	357 aa	Known RBP	13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	GPR155	Q7Z3F1	870 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	FAM72B	Q86X60	149 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	RTL3	Q8N8U3	475 aa	Known RBP	13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	DENND6B	Q8NEG7	585 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	BTN2A2	Q8WVV5	523 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	GLMN	Q92990	594 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	BMF	Q96LC9	184 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	APOLD1	Q96LR9	279 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	LENG8	Q96PV6	779 aa	Predicted RBP	13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	DEPDC7	Q96QD5	511 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	PCDHB18P	Q96TA0	734 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	IL12RB2	Q99665	862 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	TTYH3	Q9C0H2	523 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	NAT10	Q9H0A0	1025 aa	Known RBP	13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	USP29	Q9HBJ7	922 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	GPR27	Q9NS67	375 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	NCKIPSD	Q9NZQ3	722 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424		U3KQA8	63 aa		13.43	□□□□□ -0.26
UBA3-210	ENST00000485424	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	SCAMP1	O15126	338 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	FGF10	O15520	208 aa	Predicted RBP	13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	OPA1	O60313	960 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	CD160	O95971	181 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	MBD3	O95983	291 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	CSF2	P04141	144 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	MPO	P05164	745 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	MYF5	P13349	255 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	JUND	P17535	347 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	ABL2	P42684	1182 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	ZNF143	P52747	638 aa	Predicted RBP	13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	PCBP4	P57723	403 aa	Known RBP	13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	TPI1	P60174	286 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	CXADR	P78310	365 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	PTP4A2	Q12974	167 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	FGL2	Q14314	439 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	GSE1	Q14687	1217 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	GRM3	Q14832	879 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	PARP15	Q460N3	678 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	ARTN	Q5T4W7	220 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	ACAD10	Q6JQN1	1059 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	PCSK4	Q6UW60	755 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	MON1B	Q7L1V2	547 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	VPS36	Q86VN1	386 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	PYROXD2	Q8N2H3	581 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	LSM14A	Q8ND56	463 aa	Known RBP	13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	LMX1A	Q8TE12	382 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	ERGIC2	Q96RQ1	377 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	LGMN	Q99538	433 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	CNPY3	Q9BT09	278 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	MAGEB5	Q9BZ81	275 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	FZD10	Q9ULW2	581 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	DOLK	Q9UPQ8	538 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	ITM2B	Q9Y287	266 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	MAST4	O15021	2626 aa		13.42	□□□□□ -0.26
UBA3-210	ENST00000485424	RASA4B	C9J798	803 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424		K7ESM1	405 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	RIOK3	O14730	519 aa	Known RBP	13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	RAD51B	O15315	384 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	DAPK3	O43293	454 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	AQP9	O43315	295 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	RASA4	O43374	803 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	NEBL	O76041	1014 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	GP1BA	P07359	652 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	NME1	P15531	152 aa	Known RBP	13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	GABRE	P78334	506 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	ELP6	Q0PNE2	266 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	FZD2	Q14332	565 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	FILIP1L	Q4L180	1135 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	INO80D	Q53TQ3	878 aa	Predicted RBP	13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	LRRC73	Q5JTD7	316 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	CCDC183	Q5T5S1	534 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	FAXC	Q5TGI0	409 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	DNAAF5	Q86Y56	855 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	ZNF843	Q8N446	348 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	AOPEP	Q8N6M6	819 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	FAM181A	Q8N9Y4	354 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	ZNF248	Q8NDW4	579 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	IFI44	Q8TCB0	444 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	MAPK15	Q8TD08	544 aa		13.41	□□□□□ -0.26
UBA3-210	ENST00000485424	ASB12	Q8WXK4	309 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms