RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 BEND7Q8N7W2 519 aaPredicted RBP8.7□□□□□ -1.02
DDX39B-221ENST00000484566 ATP6V0D2Q8N8Y2 350 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 CLEC4CQ8WTT0 213 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 BTN2A2Q8WVV5 523 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 CCDC47Q96A33 483 aaKnown RBP8.7□□□□□ -1.02
DDX39B-221ENST00000484566 EEF2KMTQ96G04 330 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 SLC39A13Q96H72 371 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 BTN2A3PQ96KV6 586 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 HSFY1Q96LI6 401 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 CCDC3Q9BQI4 270 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 MIS12Q9H081 205 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 CAAP1Q9H8G2 361 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 GPR27Q9NS67 375 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 SPASTQ9UBP0 616 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 APOBEC3BQ9UH17 382 aaKnown RBP8.7□□□□□ -1.02
DDX39B-221ENST00000484566 SLC12A6Q9UHW9 1150 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 XPO7Q9UIA9 1087 aaKnown RBP8.7□□□□□ -1.02
DDX39B-221ENST00000484566 VPS28Q9UK41 221 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 KIAA1257Q9ULG3 409 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 MTMR6Q9Y217 621 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 HS3ST3A1Q9Y663 406 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 UNC13CQ8NB66 2214 aa8.7□□□□□ -1.02
DDX39B-221ENST00000484566 FPGTO14772 594 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 ANXA6P08133 673 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 EPB41P11171 864 aaKnown RBP8.69□□□□□ -1.02
DDX39B-221ENST00000484566 TBXAS1P24557 533 aaPredicted RBP8.69□□□□□ -1.02
DDX39B-221ENST00000484566 RECQLP46063 649 aaPredicted RBP8.69□□□□□ -1.02
DDX39B-221ENST00000484566 NEK3P51956 506 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 RPS21P63220 83 aaKnown RBP8.69□□□□□ -1.02
DDX39B-221ENST00000484566 SRSF6Q13247 344 aaKnown RBP8.69□□□□□ -1.02
DDX39B-221ENST00000484566 ADAM9Q13443 819 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 STILQ15468 1287 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 TGIF1Q15583 401 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 TBR1Q16650 682 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 ZC3H12AQ5D1E8 599 aaKnown RBP8.69□□□□□ -1.02
DDX39B-221ENST00000484566 CXorf57Q6NSI4 855 aaKnown RBP8.69□□□□□ -1.02
DDX39B-221ENST00000484566 ERN2Q76MJ5 926 aaKnown RBP8.69□□□□□ -1.02
DDX39B-221ENST00000484566 ZSCAN30Q86W11 494 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 TICAM1Q8IUC6 712 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 SLC35F3Q8IY50 421 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 SH2D3CQ8N5H7 860 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 TMIEQ8NEW7 156 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 SLC35F5Q8WV83 523 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 RPRD1AQ96P16 312 aaPredicted RBP8.69□□□□□ -1.02
DDX39B-221ENST00000484566 GFM1Q96RP9 751 aaKnown RBP8.69□□□□□ -1.02
DDX39B-221ENST00000484566 BOCQ9BWV1 1114 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 SLC17A9Q9BYT1 436 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 ADNPQ9H2P0 1102 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 GEMIN8Q9NWZ8 242 aaKnown RBP8.69□□□□□ -1.02
DDX39B-221ENST00000484566 PISDQ9UG56 409 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 DMGDHQ9UI17 866 aaKnown RBP8.69□□□□□ -1.02
DDX39B-221ENST00000484566 ZFR2Q9UPR6 939 aaKnown RBP8.69□□□□□ -1.02
DDX39B-221ENST00000484566 NAALADL1Q9UQQ1 740 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 SCN8AQ9UQD0 1980 aa8.69□□□□□ -1.02
DDX39B-221ENST00000484566 RP1L1Q8IWN7 2480 aaPredicted RBP8.69□□□□□ -1.02
DDX39B-221ENST00000484566 NIPBLQ6KC79 2804 aaeCLIP8.68□□□□□ -1.02
DDX39B-221ENST00000484566 MTORP42345 2549 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 POM121BA6NF01 834 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 KCNU1A8MYU2 1149 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 D6RAR5 112 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 NOBOXO60393 691 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 MYL1P05976 194 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 CTSLP07711 333 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 PAEPP09466 180 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 SLC2A3P11169 496 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 EPXP11678 715 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 HGFP14210 728 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 ME1P48163 572 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 THOP1P52888 689 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 KRT83P78385 493 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 MORC3Q14149 939 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 PTK2BQ14289 1009 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 NFKBIBQ15653 356 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 PRRT3Q5FWE3 981 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 DCAF17Q5H9S7 520 aaPredicted RBP8.68□□□□□ -1.02
DDX39B-221ENST00000484566 TCERG1LQ5VWI1 586 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 RESP18Q5W5W9 173 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 TMEM270Q6UE05 265 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 B3GNT8Q7Z7M8 397 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 VASH2Q86V25 355 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 TREML1Q86YW5 311 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 ATP11CQ8NB49 1132 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 ZNF564Q8TBZ8 553 aaPredicted RBP8.68□□□□□ -1.02
DDX39B-221ENST00000484566 GRIN3AQ8TCU5 1115 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 PAGE5Q96GU1 130 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 BMFQ96LC9 184 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 TBATAQ96M53 351 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 TMEM74Q96NL1 305 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 HDAC8Q9BY41 377 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 SLC13A1Q9BZW2 595 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 MUC3BQ9H195 1237 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 EPN3Q9H201 632 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 FAM204AQ9H8W3 233 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 ST7Q9NRC1 585 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.68□□□□□ -1.02
DDX39B-221ENST00000484566 PADI4Q9UM07 663 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 HS3ST2Q9Y278 367 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 LOXL2Q9Y4K0 774 aa8.68□□□□□ -1.02
DDX39B-221ENST00000484566 GOLGA6L3A6NEY3 463 aa8.67□□□□□ -1.02
DDX39B-221ENST00000484566 LMO7DNF2Z398 122 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms