RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TMEM145Q8NBT3 493 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 OR13H1Q8NG92 308 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 TSC1Q92574 1164 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 KLHDC7BQ96G42 594 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 FEM1CQ96JP0 617 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 WRAP53Q9BUR4 548 aaKnown RBP12.43□□□□□ -0.42
MSH5-216ENST00000484309 CALN1Q9BXU9 219 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 SLC17A9Q9BYT1 436 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 UVRAGQ9P2Y5 699 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 ANGPTL2Q9UKU9 493 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 PCDHGB2Q9Y5G2 931 aa12.43□□□□□ -0.42
MSH5-216ENST00000484309 GOLGA4Q13439 2230 aaKnown RBP12.43□□□□□ -0.42
MSH5-216ENST00000484309 COL5A1P20908 1838 aaPredicted RBP12.43□□□□□ -0.42
MSH5-216ENST00000484309 AP1G1O43747 822 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 HYAL3O43820 417 aaPredicted RBP12.42□□□□□ -0.42
MSH5-216ENST00000484309 MFSD11O43934 449 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 BUB1BO60566 1050 aaPredicted RBP12.42□□□□□ -0.42
MSH5-216ENST00000484309 MMP20O60882 483 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 SDC3O75056 442 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 MAP3K6O95382 1288 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 FTH1P19P0C7X4 201 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 TIMP2P16035 220 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 XPAP23025 273 aaPredicted RBP12.42□□□□□ -0.42
MSH5-216ENST00000484309 EPHA8P29322 1005 aaPredicted RBP12.42□□□□□ -0.42
MSH5-216ENST00000484309 SLC10A7Q0GE19 358 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 BNIP3Q12983 259 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 DPYSL3Q14195 570 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 SUZ12Q15022 739 aaKnown RBP12.42□□□□□ -0.42
MSH5-216ENST00000484309 CCDC157Q569K6 752 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 ZFYVE27Q5T4F4 411 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 PTAR1Q7Z6K3 402 aaPredicted RBP12.42□□□□□ -0.42
MSH5-216ENST00000484309 CAMK1DQ8IU85 385 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 ATPAF2Q8N5M1 289 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 LZTR1Q8N653 840 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 PAF1Q8N7H5 531 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 TC2NQ8N9U0 490 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 BAHD1Q8TBE0 780 aaPredicted RBP12.42□□□□□ -0.42
MSH5-216ENST00000484309 SLC35G2Q8TBE7 412 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 RAB7BQ96AH8 199 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 MYLKQ15746 1914 aa12.42□□□□□ -0.42
MSH5-216ENST00000484309 AKAP13Q12802 2813 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 POM121BA6NF01 834 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 AREL1O15033 823 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 TSPAN6O43657 245 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 PCDHGA12O60330 932 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 ITGAVP06756 1048 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 ATXN1LP0C7T5 689 aaKnown RBP12.41□□□□□ -0.42
MSH5-216ENST00000484309 IL4RP24394 825 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 GRK6P43250 576 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 ARRB1P49407 418 aaPredicted RBP12.41□□□□□ -0.42
MSH5-216ENST00000484309 SCNN1BP51168 640 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 ARSEP51690 589 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 ZNF75DP51815 510 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 SGCGQ13326 291 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 HNRNPDQ14103 355 aaKnown RBP12.41□□□□□ -0.42
MSH5-216ENST00000484309 ZNF235Q14590 738 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 LBRQ14739 615 aaKnown RBP12.41□□□□□ -0.42
MSH5-216ENST00000484309 CFAP58Q5T655 872 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 TMCO4Q5TGY1 634 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 DBX2Q6ZNG2 339 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 SLCO6A1Q86UG4 719 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 IQCHQ86VS3 1027 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 ZSWIM9Q86XI8 627 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 GAS2L3Q86XJ1 694 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 SLC22A18ASQ8N1D0 253 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 CHCHD4Q8N4Q1 142 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 KCTD6Q8NC69 237 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 CXorf40AQ8TE69 158 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 LRRN4Q8WUT4 740 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 NSMCE3Q96MG7 304 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 SCNM1Q9BWG6 230 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 CPEB1Q9BZB8 566 aaKnown RBP12.41□□□□□ -0.42
MSH5-216ENST00000484309 SUV39H2Q9H5I1 410 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 TFR2Q9UP52 801 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 COQ6Q9Y2Z9 468 aa12.41□□□□□ -0.42
MSH5-216ENST00000484309 A6NNZ2 444 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 DFNA5O60443 496 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 MAFKO60675 156 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 MAGEC1O60732 1142 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 TNNT1P13805 278 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 SERPINB6P35237 376 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 MAXP61244 160 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 ANKRD20A8PQ5CZ79 823 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 ZNF542PQ5EBM4 170 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 NCBP2-AS2Q69YL0 99 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 Q6ZSR6 202 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 PGBD5Q8N414 524 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 EID2Q8N6I1 236 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 PCDH19Q8TAB3 1148 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 FAM71BQ8TC56 605 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 SAP25Q8TEE9 199 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 BMFQ96LC9 184 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 KLF6Q99612 283 aaPredicted RBP12.4□□□□□ -0.42
MSH5-216ENST00000484309 C1QTNF2Q9BXJ5 285 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 ATP13A3Q9H7F0 1226 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 PCDH12Q9NPG4 1184 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 DKK3Q9UBP4 350 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 SEPT3Q9UH03 358 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 KLK13Q9UKR3 277 aa12.4□□□□□ -0.42
MSH5-216ENST00000484309 WASF3Q9UPY6 502 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms