RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ADPRHP54922 357 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 RPS24P62847 133 aaKnown RBP6.05□□□□□ -1.44
CSDE1-207ENST00000483407 ECT2LQ008S8 904 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 LRRC63Q05C16 580 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 CDK5R2Q13319 367 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 ILKQ13418 452 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 ELAVL3Q14576 367 aaKnown RBP6.05□□□□□ -1.44
CSDE1-207ENST00000483407 CNGA2Q16280 664 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 MS4A13Q5J8X5 152 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 PITRM1Q5JRX3 1037 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 KCNT1Q5JUK3 1230 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 FAM209AQ5JX71 171 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 PRAMEF14Q5SWL7 426 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 C9orf64Q5T6V5 341 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 YOD1Q5VVQ6 348 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-207ENST00000483407 NADSYN1Q6IA69 706 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 PMF1Q6P1K2 205 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 DSG4Q86SJ6 1040 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 PRPF39Q86UA1 669 aaKnown RBP6.05□□□□□ -1.44
CSDE1-207ENST00000483407 PPM1KQ8N3J5 372 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 EID2Q8N6I1 236 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 OR14C36Q8NHC7 312 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 PIP4K2CQ8TBX8 421 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 DQX1Q8TE96 717 aaKnown RBP6.05□□□□□ -1.44
CSDE1-207ENST00000483407 SAP25Q8TEE9 199 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 NINJ1Q92982 152 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 FAM149B1Q96BN6 582 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 SERAC1Q96JX3 654 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 LMLNQ96KR4 655 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 PRICKLE1Q96MT3 831 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-207ENST00000483407 BBC3Q96PG8 261 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-207ENST00000483407 PPP1R9BQ96SB3 815 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 KRTAP9-9Q9BYP9 154 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 GTPBP4Q9BZE4 634 aaKnown RBP6.05□□□□□ -1.44
CSDE1-207ENST00000483407 MIS12Q9H081 205 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 ERVMER34-1Q9H9K5 563 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 METTL14Q9HCE5 456 aaKnown RBP6.05□□□□□ -1.44
CSDE1-207ENST00000483407 PCDH12Q9NPG4 1184 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 SERGEFQ9UGK8 458 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 ERVW-1Q9UQF0 538 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 PCDHB4Q9Y5E5 795 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 AKAP13Q12802 2813 aa6.05□□□□□ -1.44
CSDE1-207ENST00000483407 ITIH6Q6UXX5 1313 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 hCG_2014768A0A024R1R8 64 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TBC1D3DA0A087WVF3 549 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TBC1D3IA0A087WXS9 549 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TBC1D3EA0A087X179 549 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TBC1D3KA0A087X1G2 549 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TRBV23-1A0A0A0MS06 115 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 A0A1W2PR77 199 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TBC1D3FA6NER0 549 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TTC34A8MYJ7 566 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TBC1D3LB9A6J9 549 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 C1QTNF3-AMACRE9PGA6 284 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 F5H5T6 163 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TLR4O00206 839 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 PSMA7O14818 248 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 PLD2O14939 933 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 SMC2O95347 1197 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 IL1BP01584 269 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 WNT1P04628 370 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 ITGB2P05107 769 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TBC1D3HP0C7X1 549 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 EPHA8P29322 1005 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-207ENST00000483407 EIF2S3P41091 472 aaKnown RBP6.04□□□□□ -1.44
CSDE1-207ENST00000483407 PRCPP42785 496 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 ACADSBP45954 432 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 RXRGP48443 463 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 FMO5P49326 533 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 ACADVLP49748 655 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 OXCT1P55809 520 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 NXPH1P58417 271 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 SEMG2Q02383 582 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 SULT2A1Q06520 285 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 OVGP1Q12889 678 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TARDBPQ13148 414 aaKnown RBP eCLIP6.04□□□□□ -1.44
CSDE1-207ENST00000483407 DNAJC3Q13217 504 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 PNOCQ13519 176 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 STIM1Q13586 685 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 SLC12A1Q13621 1099 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 COBLL1Q53SF7 1204 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 HS1BP3Q53T59 392 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 DCAF6Q58WW2 860 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 FSCBQ5H9T9 825 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 HES3Q5TGS1 186 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 ZNF658Q5TYW1 1059 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-207ENST00000483407 FAM46CQ5VWP2 391 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 ANKRD40Q6AI12 368 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TBC1D3GQ6DHY5 549 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TBC1D3CQ6IPX1 549 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 NAPEPLDQ6IQ20 393 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 POMZP3Q6PJE2 187 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 MMS22LQ6ZRQ5 1243 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 FAM214BQ7L5A3 538 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 IQCHQ86VS3 1027 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 CHSY1Q86X52 802 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TRIM59Q8IWR1 403 aa6.04□□□□□ -1.44
CSDE1-207ENST00000483407 TBC1D3Q8IZP1 549 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-207ENST00000483407 LGI2Q8N0V4 545 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms