RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 KIAA0895LQ68EN5 471 aa16.93■□□□□ 0.3
SF1-215ENST00000482693 BRAT1Q6PJG6 821 aa16.93■□□□□ 0.3
SF1-215ENST00000482693 PARS2Q7L3T8 475 aaKnown RBP16.93■□□□□ 0.3
SF1-215ENST00000482693 ARMCX6Q7L4S7 300 aa16.93■□□□□ 0.3
SF1-215ENST00000482693 TTC7BQ86TV6 843 aa16.93■□□□□ 0.3
SF1-215ENST00000482693 ZC3H18Q86VM9 953 aaKnown RBP16.93■□□□□ 0.3
SF1-215ENST00000482693 SYT12Q8IV01 421 aa16.93■□□□□ 0.3
SF1-215ENST00000482693 ACTL9Q8TC94 416 aa16.93■□□□□ 0.3
SF1-215ENST00000482693 DNASE2BQ8WZ79 361 aa16.93■□□□□ 0.3
SF1-215ENST00000482693 HAUS1Q96CS2 278 aa16.93■□□□□ 0.3
SF1-215ENST00000482693 FERMT1Q9BQL6 677 aa16.93■□□□□ 0.3
SF1-215ENST00000482693 TLR10Q9BXR5 811 aa16.93■□□□□ 0.3
SF1-215ENST00000482693 PYCARDQ9ULZ3 195 aa16.93■□□□□ 0.3
SF1-215ENST00000482693 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.93■□□□□ 0.3
SF1-215ENST00000482693 A0A1W2PQ67 120 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 C10orf142B7Z368 130 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 KCNK3O14649 394 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 GFRA3O60609 400 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 FSBPO95073 299 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 PIGNO95427 931 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 TIMP2P16035 220 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 ITPKAP23677 461 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 MAXP61244 160 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 POLR2LP62875 67 aaKnown RBP16.92■□□□□ 0.3
SF1-215ENST00000482693 OTUD4Q01804 1114 aaKnown RBP16.92■□□□□ 0.3
SF1-215ENST00000482693 CREB5Q02930 508 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 KLF1Q13351 362 aaPredicted RBP16.92■□□□□ 0.3
SF1-215ENST00000482693 ZNF569Q5MCW4 686 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 RABEPKQ7Z6M1 372 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 QKIQ96PU8 341 aaKnown RBP eCLIP16.92■□□□□ 0.36e-44■■■■□ 23
SF1-215ENST00000482693 SEMA3CQ99985 751 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 ARRDC1-AS1Q9H2J1 176 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 SEPT10Q9P0V9 454 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 PILRBQ9UKJ0 227 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 FADS3Q9Y5Q0 445 aa16.92■□□□□ 0.3
SF1-215ENST00000482693 TTC24A2A3L6 582 aaPredicted RBP16.91■□□□□ 0.3
SF1-215ENST00000482693 H7C0C1 242 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 TRAFD1O14545 582 aaPredicted RBP16.91■□□□□ 0.3
SF1-215ENST00000482693 TSPAN6O43657 245 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 SOCS5O75159 536 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 GJB3O75712 270 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 HLA-DQB2P05538 268 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 IGHV4-34P06331 123 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 XPAP23025 273 aaPredicted RBP16.91■□□□□ 0.3
SF1-215ENST00000482693 NUDT1P36639 197 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 ATP5OP48047 213 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 EIF3EP60228 445 aaKnown RBP16.91■□□□□ 0.3
SF1-215ENST00000482693 ZBTB17Q13105 803 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 TEX44Q53QW1 395 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 PEAR1Q5VY43 1037 aaPredicted RBP16.91■□□□□ 0.3
SF1-215ENST00000482693 B4GALNT4Q76KP1 1039 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 ZSCAN30Q86W11 494 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 TRIM69Q86WT6 500 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 CDKL3Q8IVW4 592 aaPredicted RBP16.91■□□□□ 0.3
SF1-215ENST00000482693 RGL4Q8IZJ4 473 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 GPR161Q8N6U8 529 aaKnown RBP16.91■□□□□ 0.3
SF1-215ENST00000482693 CNTD1Q8N815 330 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 CEP76Q8TAP6 659 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 HTR3CQ8WXA8 447 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 SPOCK2Q92563 424 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 PIGKQ92643 395 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 BIRC7Q96CA5 298 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 ECHDC3Q96DC8 303 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 VAT1Q99536 393 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 VPS45Q9NRW7 570 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.91■□□□□ 0.3
SF1-215ENST00000482693 WDR87Q6ZQQ6 2873 aa16.91■□□□□ 0.3
SF1-215ENST00000482693 HTRA2O43464 458 aaPredicted RBP16.9■□□□□ 0.3
SF1-215ENST00000482693 LATO43561 262 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 PCDH8O95206 1070 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 GNSP15586 552 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 PTPN3P26045 913 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 CD27P26842 260 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 MPLP40238 635 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 DSC2Q02487 901 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 UGP2Q16851 508 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 PLA2G2CQ5R387 149 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 SLC13A5Q86YT5 568 aaPredicted RBP16.9■□□□□ 0.3
SF1-215ENST00000482693 PAF1Q8N7H5 531 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 ARRDC2Q8TBH0 407 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 FEM1CQ96JP0 617 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 TEKT5Q96M29 485 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 NSMCE3Q96MG7 304 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 AGAP3Q96P47 875 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 HINFPQ9BQA5 517 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 FRMD8P1Q9BZ68 369 aaPredicted RBP16.9■□□□□ 0.3
SF1-215ENST00000482693 SUSD2Q9UGT4 822 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 TRHDEQ9UKU6 1024 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 TTLL3Q9Y4R7 772 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 PCDHGC4Q9Y5F7 938 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 ABCA7Q8IZY2 2146 aa16.9■□□□□ 0.3
SF1-215ENST00000482693 GPR179Q6PRD1 2367 aa16.89■□□□□ 0.3
SF1-215ENST00000482693 USP27XA6NNY8 438 aa16.89■□□□□ 0.29
SF1-215ENST00000482693 UPK3BL1B0FP48 263 aa16.89■□□□□ 0.29
SF1-215ENST00000482693 UPK3BL2E5RIL1 263 aa16.89■□□□□ 0.29
SF1-215ENST00000482693 NEMP1O14524 444 aa16.89■□□□□ 0.29
SF1-215ENST00000482693 AREL1O15033 823 aa16.89■□□□□ 0.29
SF1-215ENST00000482693 FOXD2O60548 495 aaPredicted RBP16.89■□□□□ 0.29
SF1-215ENST00000482693 RNGTTO60942 597 aaKnown RBP16.89■□□□□ 0.29
SF1-215ENST00000482693 SERPINF2P08697 491 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms