RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 MT-CO3P00414 261 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 GIMD1P0DJR0 217 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 GZMAP12544 262 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 NME1P15531 152 aaKnown RBP13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 PSMA2P25787 234 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 SUOXP51687 545 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 NDST2P52849 883 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 THOP1P52888 689 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 YPEL5P62699 121 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 SEMG2Q02383 582 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 ELP6Q0PNE2 266 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 RTP5Q14D33 572 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 ASIC2Q16515 512 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 ERMARDQ5T6L9 678 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 CYP4V2Q6ZWL3 525 aaPredicted RBP13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 FAM181AQ8N9Y4 354 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 CENPTQ96BT3 561 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 PEBP4Q96S96 227 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 NCAPGQ9BPX3 1015 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 ABCG4Q9H172 646 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 HAUS4Q9H6D7 363 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 GPATCH2LQ9NWQ4 482 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 NCKIPSDQ9NZQ3 722 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 UBA2Q9UBT2 640 aaPredicted RBP13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 AP4E1Q9UPM8 1137 aa13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 COL27A1Q8IZC6 1860 aaPredicted RBP13.61□□□□□ -0.23
CTDSP1-208ENST00000482272 MYLKQ15746 1914 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 A0A087WV48 116 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 ARHGAP42A6NI28 874 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 K7ESM1 405 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 EEF2KO00418 725 aaKnown RBP13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 GP1BAP07359 652 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 TIMP2P16035 220 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 JUNDP17535 347 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 ITIH2P19823 946 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 ATRXP46100 2492 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 PFN3P60673 137 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 IQCB1Q15051 598 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 CYTH1Q15438 398 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 CA9Q16790 459 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 LRRC73Q5JTD7 316 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 TPRG1LQ5T0D9 272 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 PLEKHA7Q6IQ23 1121 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 CAVIN1Q6NZI2 390 aaKnown RBP13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 ZCCHC8Q6NZY4 707 aaKnown RBP13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 LRRC69Q6ZNQ3 347 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 PDZD3Q86UT5 571 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 VPS36Q86VN1 386 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 DCBLD1Q8N8Z6 715 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 ZNF548Q8NEK5 533 aaPredicted RBP13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 DCBLD2Q96PD2 775 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 IL12RB2Q99665 862 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 SUV39H2Q9H5I1 410 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 DHX35Q9H5Z1 703 aaKnown RBP13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 AIPL1Q9NZN9 384 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 SPASTQ9UBP0 616 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 PCSK1NQ9UHG2 260 aa13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 ARID1BQ8NFD5 2236 aaPredicted RBP13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 TDRD6O60522 2096 aaKnown RBP13.6□□□□□ -0.23
CTDSP1-208ENST00000482272 TMEM191CA6NGB0 347 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 TPP1O14773 563 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 RRP8O43159 456 aaKnown RBP13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 AQP9O43315 295 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 PRPSAP2O60256 369 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 OPA1O60313 960 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 NEBLO76041 1014 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 FTLP02792 175 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 ZNF165P49910 485 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 UGP2Q16851 508 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 KLHL40Q2TBA0 621 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 TMEM52BQ4KMG9 183 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 CFAP58Q5T655 872 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 ZNF571Q7Z3V5 609 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 LMX1AQ8TE12 382 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 CELF6Q96J87 481 aaKnown RBP13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 EXOC2Q96KP1 924 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 ZNF641Q96N77 438 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 EDEM3Q9BZQ6 932 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 SLC39A8Q9C0K1 460 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 LRRC19Q9H756 370 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 SALL4Q9UJQ4 1053 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 ITPR1Q14643 2758 aa13.59□□□□□ -0.23
CTDSP1-208ENST00000482272 A0A1B0GTH6 734 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 A0A1W2PQC6 194 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 TMEM110-MUSTN1A8MSY1 372 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 J3KR12 359 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 DDX3XO00571 662 aaKnown RBP eCLIP13.58□□□□□ -0.241e-9■□□□□ 10.9
CTDSP1-208ENST00000482272 INSIG1O15503 277 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 PRAMEF11O60813 436 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 PALMO75781 387 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 ACTN2P35609 894 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 EIF4A3P38919 411 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 EIF2S3P41091 472 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 ABCG1P45844 678 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 PAPOLAP51003 745 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 BLKP51451 505 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 ZNF135P52742 658 aaPredicted RBP13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 KLHL30Q0D2K2 578 aa13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 EIF2B5Q13144 721 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-208ENST00000482272 FAXCQ5TGI0 409 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms