RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 KAT2AQ92830 837 aa3.96□□□□□ -1.78
COPA-204ENST00000481522 CAPNS2Q96L46 248 aa3.96□□□□□ -1.78
COPA-204ENST00000481522 HERC2P3Q9BVR0 1158 aa3.96□□□□□ -1.78
COPA-204ENST00000481522 TMEM248Q9NWD8 314 aa3.96□□□□□ -1.78
COPA-204ENST00000481522 SUFUQ9UMX1 484 aa3.96□□□□□ -1.78
COPA-204ENST00000481522 DNAJC16Q9Y2G8 782 aa3.96□□□□□ -1.78
COPA-204ENST00000481522 PEAK1Q9H792 1746 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 NOTCH4Q99466 2003 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 GOLGA3Q08378 1498 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 TCRBV7S3A2A0A539 114 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 ANP32CO43423 234 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 NEURL1O76050 574 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 TYK2P29597 1187 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 ZBTB16Q05516 673 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 SLC12A1Q13621 1099 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 C5orf22Q49AR2 442 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 TMEM31Q5JXX7 168 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 CBWD5Q5RIA9 395 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 VWA5B1Q5TIE3 1220 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 FAM171A1Q5VUB5 890 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 NUGGCQ68CJ6 796 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 RNF144BQ7Z419 303 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 BRSK2Q8IWQ3 736 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 SMAP1Q8IYB5 467 aaPredicted RBP3.95□□□□□ -1.78
COPA-204ENST00000481522 USP38Q8NB14 1042 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 C2CD4CQ8TF44 421 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 IFT27Q9BW83 186 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 CADM1Q9BY67 442 aaKnown RBP3.95□□□□□ -1.78
COPA-204ENST00000481522 VPS33BQ9H267 617 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 ACAD9Q9H845 621 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 Q9N2J8 555 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 SLIT1O75093 1534 aa3.95□□□□□ -1.78
COPA-204ENST00000481522 SMG1Q96Q15 3661 aaKnown RBP3.94□□□□□ -1.78
COPA-204ENST00000481522 MLH3Q9UHC1 1453 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 FBN2P35556 2912 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 EIF3FO00303 357 aaPredicted RBP3.94□□□□□ -1.78
COPA-204ENST00000481522 MDM4O15151 490 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 TSPAN3O60637 253 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 ATG13O75143 517 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 CNPP09543 421 aaKnown RBP3.94□□□□□ -1.78
COPA-204ENST00000481522 CPA1P15085 419 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 KLRC2P26717 231 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 AVPR2P30518 371 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 MVDP53602 400 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 LINC00205P59089 165 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 SEMA3AQ14563 771 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 TMEM95Q3KNT9 176 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 PLK5Q496M5 336 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 ENTPD8Q5MY95 495 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 AADACL2Q6P093 401 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 DENND1BQ6P3S1 775 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 ZNF549Q6P9A3 640 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 C9orf47Q6ZRZ4 202 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 KDELC2Q7Z4H8 507 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 CTU1Q7Z7A3 348 aaKnown RBP3.94□□□□□ -1.78
COPA-204ENST00000481522 FAM185AQ8N0U4 392 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 DPP10Q8N608 796 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 TMEM217Q8N7C4 229 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 TMEM174Q8WUU8 243 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 NCSTNQ92542 709 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 MSI2Q96DH6 328 aaKnown RBP3.94□□□□□ -1.78
COPA-204ENST00000481522 TWNKQ96RR1 684 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.94□□□□□ -1.78
COPA-204ENST00000481522 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.94□□□□□ -1.78
COPA-204ENST00000481522 RBM38Q9H0Z9 239 aaKnown RBP3.94□□□□□ -1.78
COPA-204ENST00000481522 ACTR5Q9H9F9 607 aaPredicted RBP3.94□□□□□ -1.78
COPA-204ENST00000481522 MRPL44Q9H9J2 332 aaKnown RBP3.94□□□□□ -1.78
COPA-204ENST00000481522 IL21RQ9HBE5 538 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 ZNF304Q9HCX3 659 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 SPAG4Q9NPE6 437 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 RIC8AQ9NPQ8 531 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 RNF146Q9NTX7 359 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 TEX15Q9BXT5 2789 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 SPATA31E1Q6ZUB1 1445 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 NCOA3Q9Y6Q9 1424 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 MYO15AQ9UKN7 3530 aa3.94□□□□□ -1.78
COPA-204ENST00000481522 FAM90A8PA6NJQ4 464 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 STRNO43815 780 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 HBP1O60381 514 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 WEE2P0C1S8 567 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 FAM90A13PP0C7W8 464 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 FAM90A24PP0C7X0 464 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 FCGR2AP12318 317 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 ARSAP15289 507 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 SKIV2L2P42285 1042 aaKnown RBP3.93□□□□□ -1.78
COPA-204ENST00000481522 POLD2P49005 469 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 HTR6P50406 440 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 ARHGAP8P85298 464 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 UBE3AQ05086 875 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 BYSLQ13895 437 aaKnown RBP3.93□□□□□ -1.78
COPA-204ENST00000481522 MAP3K21Q5TCX8 1036 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 TTLL5Q6EMB2 1281 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 KIAA1161Q6NSJ0 714 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 AAGABQ6PD74 315 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 DLK2Q6UY11 383 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 CYP26C1Q6V0L0 522 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 LRRTM4Q86VH4 590 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 SLC25A41Q8N5S1 370 aa3.93□□□□□ -1.78
COPA-204ENST00000481522 SCAIQ8N9R8 606 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms