RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 AMPD1P23109 780 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 CSNK1DP48730 415 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 SUOXP51687 545 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 HADHQ16836 314 aaKnown RBP17.21■□□□□ 0.35
HSPG2-209ENST00000480900 SARM1Q6SZW1 724 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 TMCO3Q6UWJ1 677 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 GCNT7Q6ZNI0 430 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 RAB44Q7Z6P3 723 aaPredicted RBP17.21■□□□□ 0.35
HSPG2-209ENST00000480900 TTC7BQ86TV6 843 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 FAM71BQ8TC56 605 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 ASB12Q8WXK4 309 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 ADAMTS14Q8WXS8 1223 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 TSC1Q92574 1164 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 TUBGCP5Q96RT8 1024 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 IPO11Q9UI26 975 aaKnown RBP17.21■□□□□ 0.35
HSPG2-209ENST00000480900 GGT7Q9UJ14 662 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 ITM2BQ9Y287 266 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 NEUROG3Q9Y4Z2 214 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 HS3ST3A1Q9Y663 406 aa17.21■□□□□ 0.35
HSPG2-209ENST00000480900 SPEGQ15772 3267 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 IGLON5A6NGN9 336 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 A6NNZ2 444 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 TNFSF14O43557 240 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 PROSCO94903 275 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 PAK4O96013 591 aaPredicted RBP17.2■□□□□ 0.34
HSPG2-209ENST00000480900 ITGAVP06756 1048 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 TMEM253P0C7T8 217 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 SGCGQ13326 291 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 TMCO4Q5TGY1 634 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 KYAT3Q6YP21 454 aaKnown RBP17.2■□□□□ 0.34
HSPG2-209ENST00000480900 ARHGAP36Q6ZRI8 547 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 GATAD2AQ86YP4 633 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 DCP2Q8IU60 420 aaKnown RBP17.2■□□□□ 0.34
HSPG2-209ENST00000480900 CNGA4Q8IV77 575 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 DENND6BQ8NEG7 585 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 ZNF641Q96N77 438 aaPredicted RBP17.2■□□□□ 0.34
HSPG2-209ENST00000480900 ZNF599Q96NL3 588 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 LENG8Q96PV6 779 aaPredicted RBP17.2■□□□□ 0.34
HSPG2-209ENST00000480900 CINPQ9BW66 212 aaPredicted RBP17.2■□□□□ 0.34
HSPG2-209ENST00000480900 PACSIN1Q9BY11 444 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 SUV39H2Q9H5I1 410 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 ETNK2Q9NVF9 386 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 FTSJ1Q9UET6 329 aa17.2■□□□□ 0.34
HSPG2-209ENST00000480900 ACACAQ13085 2346 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 KMT2BQ9UMN6 2715 aaPredicted RBP17.19■□□□□ 0.34
HSPG2-209ENST00000480900 DKK1O94907 266 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 PIGNO95427 931 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 TIMP2P16035 220 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 SPINK2P20155 84 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 XPAP23025 273 aaPredicted RBP17.19■□□□□ 0.34
HSPG2-209ENST00000480900 SERPINB6P35237 376 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 SSR1P43307 286 aaKnown RBP17.19■□□□□ 0.34
HSPG2-209ENST00000480900 RGRP47804 291 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 ADKP55263 362 aaKnown RBP17.19■□□□□ 0.34
HSPG2-209ENST00000480900 CDH6P55285 790 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 CLDN2P57739 230 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 NSUN2Q08J23 767 aaKnown RBP eCLIP17.19■□□□□ 0.34
HSPG2-209ENST00000480900 ELP6Q0PNE2 266 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 TBX2Q13207 712 aaPredicted RBP17.19■□□□□ 0.34
HSPG2-209ENST00000480900 KRT81Q14533 505 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 BRAT1Q6PJG6 821 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 PTAR1Q7Z6K3 402 aaPredicted RBP17.19■□□□□ 0.34
HSPG2-209ENST00000480900 SRLQ86TD4 932 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 SLCO6A1Q86UG4 719 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 TP53INP2Q8IXH6 220 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 TSEN2Q8NCE0 465 aaKnown RBP17.19■□□□□ 0.34
HSPG2-209ENST00000480900 OR13H1Q8NG92 308 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 CCDC42Q96M95 316 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 PSKH2Q96QS6 385 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 KLF6Q99612 283 aaPredicted RBP17.19■□□□□ 0.34
HSPG2-209ENST00000480900 CHP1Q99653 195 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 GPR27Q9NS67 375 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 KLHL11Q9NVR0 708 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 TOR4AQ9NXH8 423 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 SEPT3Q9UH03 358 aa17.19■□□□□ 0.34
HSPG2-209ENST00000480900 RAD51BO15315 384 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 BUB1BO60566 1050 aaPredicted RBP17.18■□□□□ 0.34
HSPG2-209ENST00000480900 ATXN1LP0C7T5 689 aaKnown RBP17.18■□□□□ 0.34
HSPG2-209ENST00000480900 MAN1A1P33908 653 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 RENBPP51606 427 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 ARSEP51690 589 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 BNIP3Q12983 259 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 LRRC73Q5JTD7 316 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 Q6ZSR6 202 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 KANSL1Q7Z3B3 1105 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 SLC22A18ASQ8N1D0 253 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 CHCHD4Q8N4Q1 142 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 CXorf40AQ8TE69 158 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 IFT43Q96FT9 208 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 BMFQ96LC9 184 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 CALN1Q9BXU9 219 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 TRIM5Q9C035 493 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 ATP13A3Q9H7F0 1226 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 NHEJ1Q9H9Q4 299 aaPredicted RBP17.18■□□□□ 0.34
HSPG2-209ENST00000480900 KLK13Q9UKR3 277 aa17.18■□□□□ 0.34
HSPG2-209ENST00000480900 FAM221BA6H8Z2 402 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 POM121BA6NF01 834 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 AKR1B15C9JRZ8 316 aaPredicted RBP17.17■□□□□ 0.34
HSPG2-209ENST00000480900 FPGTO14772 594 aa17.17■□□□□ 0.34
HSPG2-209ENST00000480900 KRT7P08729 469 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms