RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 TIMP2P16035 220 aa19.07■□□□□ 0.64
ABCF3-214ENST00000480562 THOP1P52888 689 aa19.07■□□□□ 0.64
ABCF3-214ENST00000480562 RHOAP61586 193 aa19.07■□□□□ 0.64
ABCF3-214ENST00000480562 RAD51Q06609 339 aa19.07■□□□□ 0.64
ABCF3-214ENST00000480562 C1QBPQ07021 282 aaKnown RBP19.07■□□□□ 0.64
ABCF3-214ENST00000480562 C1orf61Q13536 156 aa19.07■□□□□ 0.64
ABCF3-214ENST00000480562 GUSBP11Q6P575 273 aa19.07■□□□□ 0.64
ABCF3-214ENST00000480562 SASS6Q6UVJ0 657 aa19.07■□□□□ 0.64
ABCF3-214ENST00000480562 EFL1Q7Z2Z2 1120 aaKnown RBP19.07■□□□□ 0.64
ABCF3-214ENST00000480562 ANKRD20A12PQ8NF67 263 aa19.07■□□□□ 0.64
ABCF3-214ENST00000480562 EXOC2Q96KP1 924 aa19.07■□□□□ 0.64
ABCF3-214ENST00000480562 EPAS1Q99814 870 aa19.07■□□□□ 0.64
ABCF3-214ENST00000480562 MBNL1Q9NR56 388 aaKnown RBP19.07■□□□□ 0.64
ABCF3-214ENST00000480562 PNMA8BQ9ULN7 279 aaPredicted RBP19.07■□□□□ 0.64
ABCF3-214ENST00000480562 ANKRD62A6NC57 917 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 GCATO75600 419 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 TM7SF2O76062 418 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 CDK11BP21127 795 aaKnown RBP19.06■□□□□ 0.64
ABCF3-214ENST00000480562 TGM2P21980 687 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 YBEYP58557 167 aaPredicted RBP19.06■□□□□ 0.64
ABCF3-214ENST00000480562 GABREP78334 506 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 MYL5Q02045 173 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 OGDHQ02218 1023 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 SERINC3Q13530 473 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 CYTH1Q15438 398 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 INO80DQ53TQ3 878 aaPredicted RBP19.06■□□□□ 0.64
ABCF3-214ENST00000480562 CXorf40AQ8TE69 158 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 CASKIN2Q8WXE0 1202 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 NAF1Q96HR8 494 aaKnown RBP19.06■□□□□ 0.64
ABCF3-214ENST00000480562 FCRL3Q96P31 734 aaPredicted RBP19.06■□□□□ 0.64
ABCF3-214ENST00000480562 ERGIC2Q96RQ1 377 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 UBL7Q96S82 380 aaPredicted RBP19.06■□□□□ 0.64
ABCF3-214ENST00000480562 IL12RB2Q99665 862 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 CNPY3Q9BT09 278 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 ANO10Q9NW15 660 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 LHX3Q9UBR4 397 aa19.06■□□□□ 0.64
ABCF3-214ENST00000480562 APOBEC3BQ9UH17 382 aaKnown RBP19.06■□□□□ 0.64
ABCF3-214ENST00000480562 PIGNO95427 931 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 PTK2BQ14289 1009 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 KLHL40Q2TBA0 621 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 PARP15Q460N3 678 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 PRRT3Q5FWE3 981 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 PPP1R15BQ5SWA1 713 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 DCUN1D2Q6PH85 259 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 CRTC1Q6UUV9 634 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 APTXQ7Z2E3 356 aaKnown RBP19.05■□□□□ 0.64
ABCF3-214ENST00000480562 SPACA3Q8IXA5 215 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 PHACTR4Q8IZ21 702 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 CATSPERBQ9H7T0 1116 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 GPATCH2LQ9NWQ4 482 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 SPASTQ9UBP0 616 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 DKK3Q9UBP4 350 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 SALL4Q9UJQ4 1053 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 MFHAS1Q9Y4C4 1052 aa19.05■□□□□ 0.64
ABCF3-214ENST00000480562 SHROOM3Q8TF72 1996 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 WASH4PA8MWX3 477 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 TPP1O14773 563 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 XPAP23025 273 aaPredicted RBP19.04■□□□□ 0.64
ABCF3-214ENST00000480562 ADKP55263 362 aaKnown RBP19.04■□□□□ 0.64
ABCF3-214ENST00000480562 TLE3Q04726 772 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 NR0B2Q15466 257 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 STX1AQ16623 288 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 FAXCQ5TGI0 409 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 ACAD10Q6JQN1 1059 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 MCOLN2Q8IZK6 566 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 UMODL1-AS1Q8N2C9 162 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 TP53I13Q8NBR0 393 aaPredicted RBP19.04■□□□□ 0.64
ABCF3-214ENST00000480562 BTN2A2Q8WVV5 523 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 NCAPGQ9BPX3 1015 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 LRRC61Q9BV99 259 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 HSD3B7Q9H2F3 369 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 TAS2R14Q9NYV8 317 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 UBA2Q9UBT2 640 aaPredicted RBP19.04■□□□□ 0.64
ABCF3-214ENST00000480562 COQ6Q9Y2Z9 468 aa19.04■□□□□ 0.64
ABCF3-214ENST00000480562 LRRC10BA6NIK2 292 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 J3KR12 359 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 MUSKO15146 869 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 CASC3O15234 703 aaKnown RBP19.03■□□□□ 0.64
ABCF3-214ENST00000480562 PRB1P04280 392 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 FERP16591 822 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 EIF4A3P38919 411 aaKnown RBP19.03■□□□□ 0.64
ABCF3-214ENST00000480562 LSSP48449 732 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 TPI1P60174 286 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 YPEL5P62699 121 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 NCAPHQ15003 741 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 IRF4Q15306 451 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 ISXQ2M1V0 245 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 TMEM52BQ4KMG9 183 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 PERM1Q5SV97 790 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 CELF6Q96J87 481 aaKnown RBP19.03■□□□□ 0.64
ABCF3-214ENST00000480562 ZNF578Q96N58 590 aaPredicted RBP19.03■□□□□ 0.64
ABCF3-214ENST00000480562 LGMNQ99538 433 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 BOCQ9BWV1 1114 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 C1QTNF7Q9BXJ2 289 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 CPEB1Q9BZB8 566 aaKnown RBP19.03■□□□□ 0.64
ABCF3-214ENST00000480562 SLC13A1Q9BZW2 595 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 CLPBQ9H078 707 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 POLR1BQ9H9Y6 1135 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 NCKIPSDQ9NZQ3 722 aa19.03■□□□□ 0.64
ABCF3-214ENST00000480562 EME2A4GXA9 379 aaPredicted RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms