RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 HALP42357 657 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 RPS9P46781 194 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 UBE3AQ05086 875 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 GRIK2Q13002 908 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PRKD1Q15139 912 aaPredicted RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ZNF829Q3KNS6 432 aaPredicted RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 FBXO43Q4G163 708 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 EARS2Q5JPH6 523 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 AFTPHQ6ULP2 937 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 GPRIN3Q6ZVF9 776 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 CXXC5Q7LFL8 322 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PEG10Q86TG7 708 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 TMEM169Q96HH4 297 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PLEKHG4BQ96PX9 1271 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 TBL1YQ9BQ87 522 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 MTG1Q9BT17 334 aaPredicted RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 FAIM2Q9BWQ8 316 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 TUT1Q9H6E5 874 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 IGSF9Q9P2J2 1179 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 XPR1Q9UBH6 696 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 TMEM59LQ9UK28 342 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 KCNH4Q9UQ05 1017 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PCDHB5Q9Y5E4 795 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 WDR27A2RRH5 827 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 FAM86B1E9PN63 330 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 UBXN8O00124 270 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PGRMC2O15173 223 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 TRUB2O95900 331 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 FAM86B2P0C5J1 330 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ANXA8P13928 327 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 GRIA4P48058 902 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 LGALS3BPQ08380 585 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 COX10Q12887 443 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 IL18R1Q13478 541 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 DDX39BQ13838 428 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 LSM12Q3MHD2 195 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ZBED5Q49AG3 693 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 KCTD21Q4G0X4 260 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 EIF3MQ7L2H7 374 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ADCK2Q7Z695 626 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 EPHX4Q8IUS5 362 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 OFCC1Q8IZS5 231 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 REPS2Q8NFH8 660 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 HAVCR1Q96D42 359 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 CLPTM1LQ96KA5 538 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ZNF317Q96PQ6 595 aaPredicted RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 HGH1Q9BTY7 390 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 GPRC5CQ9NQ84 441 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PXMP2Q9NR77 195 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 SPATA31A6Q5VVP1 1343 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 CDC42BPBQ9Y5S2 1711 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 DDX3YO15523 660 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 RGS10O43665 173 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 RNASEH1O60930 286 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 FADS2O95864 444 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 CCNB1P14635 433 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ATF6P18850 670 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 CDH4P55283 916 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ZNF33AQ06730 810 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 TAF5Q15542 800 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 NDUFAF6Q330K2 333 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 GALNTL6Q49A17 601 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ARHGAP15Q53QZ3 475 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 RUNDC3AQ59EK9 446 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 HERC6Q8IVU3 1022 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PCSK9Q8NBP7 692 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC35B2Q8TB61 432 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 MRPL9Q9BYD2 267 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ARL8BQ9NVJ2 186 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 IPPQ9Y573 584 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PCDHB1Q9Y5F3 818 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 FAM240BA0A1B0GVZ2 78 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC7A4O43246 635 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 FAM189A1O60320 539 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 LYPLA1O75608 230 aaPredicted RBP6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC22A3O75751 556 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 SHBGP04278 402 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 DSG3P32926 999 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 TBX4P57082 545 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 LAMTOR4Q0VGL1 99 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 ZNF57Q68EA5 555 aaPredicted RBP6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 PLPPR4Q7Z2D5 763 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 PCDH20Q8N6Y1 951 aaKnown RBP6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 BANPQ8N9N5 519 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 EEF1AKMT1Q8WVE0 214 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 SNRNP25Q9BV90 132 aaKnown RBP6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 TLR8Q9NR97 1041 aaKnown RBP6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 ABCA6Q8N139 1617 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 HSMCR30P0CW71 290 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 THRBP10828 461 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 TCF4P15884 667 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 AMPD1P23109 780 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 MZF1P28698 734 aaPredicted RBP6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 PIK3CBP42338 1070 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 IDH2P48735 452 aaKnown RBP6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 ATP13A4Q4VNC1 1196 aa6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 ZC3H12AQ5D1E8 599 aaKnown RBP6.19□□□□□ -1.42
PRPF4B-205ENST00000480058 SGO1Q5FBB7 561 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms