RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 RABEPKQ7Z6M1 372 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 ZC3H18Q86VM9 953 aaKnown RBP10.95□□□□□ -0.66
ATG4B-219ENST00000479941 CAMK1DQ8IU85 385 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 SYT12Q8IV01 421 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 RGL4Q8IZJ4 473 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 TBC1D3Q8IZP1 549 aaPredicted RBP10.95□□□□□ -0.66
ATG4B-219ENST00000479941 PGBD5Q8N414 524 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 DEFB119Q8N690 84 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 TTC13Q8NBP0 860 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 LRRN4Q8WUT4 740 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 TFB1MQ8WVM0 346 aaKnown RBP10.95□□□□□ -0.66
ATG4B-219ENST00000479941 DNASE2BQ8WZ79 361 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 HAUS1Q96CS2 278 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 IL12RB2Q99665 862 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 HERPUD2Q9BSE4 406 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 ARRDC1-AS1Q9H2J1 176 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 PREBQ9HCU5 417 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 SCUBE2Q9NQ36 999 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 SUSD2Q9UGT4 822 aa10.95□□□□□ -0.66
ATG4B-219ENST00000479941 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.95□□□□□ -0.66
ATG4B-219ENST00000479941 A0A1W2PQ67 120 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 TSPAN11A1L157 253 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 C10orf142B7Z368 130 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 KCNK1O00180 336 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 AP1G1O43747 822 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 FOXD2O60548 495 aaPredicted RBP10.94□□□□□ -0.66
ATG4B-219ENST00000479941 SOCS5O75159 536 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 ZNF189O75820 626 aaPredicted RBP10.94□□□□□ -0.66
ATG4B-219ENST00000479941 FSBPO95073 299 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 PIGNO95427 931 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 ITPKAP23677 461 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 NUDT1P36639 197 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 MPLP40238 635 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 CCR5P51681 352 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 TAS2R38P59533 333 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 MAXP61244 160 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 POLR2LP62875 67 aaKnown RBP10.94□□□□□ -0.66
ATG4B-219ENST00000479941 OTUD4Q01804 1114 aaKnown RBP10.94□□□□□ -0.66
ATG4B-219ENST00000479941 PRKD1Q15139 912 aaPredicted RBP10.94□□□□□ -0.66
ATG4B-219ENST00000479941 TEX44Q53QW1 395 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 PEAR1Q5VY43 1037 aaPredicted RBP10.94□□□□□ -0.66
ATG4B-219ENST00000479941 KIAA0895LQ68EN5 471 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 AADACL2Q6P093 401 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 TTC7BQ86TV6 843 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 GPR161Q8N6U8 529 aaKnown RBP10.94□□□□□ -0.66
ATG4B-219ENST00000479941 CEP76Q8TAP6 659 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 ACTL9Q8TC94 416 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 SPOCK2Q92563 424 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 PIGKQ92643 395 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 BIRC7Q96CA5 298 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 ECHDC3Q96DC8 303 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 VAT1Q99536 393 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 SEMA3CQ99985 751 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 HINFPQ9BQA5 517 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 FERMT1Q9BQL6 677 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 TLR10Q9BXR5 811 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 NOD2Q9HC29 1040 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 VPS45Q9NRW7 570 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 TRMT1Q9NXH9 659 aaKnown RBP10.94□□□□□ -0.66
ATG4B-219ENST00000479941 PILRBQ9UKJ0 227 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 ATP8A1Q9Y2Q0 1164 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 JRKLQ9Y4A0 524 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 TTLL3Q9Y4R7 772 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 FADS3Q9Y5Q0 445 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 SHROOM3Q8TF72 1996 aa10.94□□□□□ -0.66
ATG4B-219ENST00000479941 TTC24A2A3L6 582 aaPredicted RBP10.93□□□□□ -0.66
ATG4B-219ENST00000479941 TRAFD1O14545 582 aaPredicted RBP10.93□□□□□ -0.66
ATG4B-219ENST00000479941 KCNK3O14649 394 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 HTRA2O43464 458 aaPredicted RBP10.93□□□□□ -0.66
ATG4B-219ENST00000479941 LATO43561 262 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 TSPAN6O43657 245 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 KIF5CO60282 957 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 GJB3O75712 270 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 HLA-DQB2P05538 268 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 IGHV4-34P06331 123 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 SERPINF2P08697 491 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 GNSP15586 552 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 XPAP23025 273 aaPredicted RBP10.93□□□□□ -0.66
ATG4B-219ENST00000479941 NFKBIAP25963 317 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 CD27P26842 260 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 ELP6Q0PNE2 266 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 ZBTB17Q13105 803 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 KLF1Q13351 362 aaPredicted RBP10.93□□□□□ -0.66
ATG4B-219ENST00000479941 UGP2Q16851 508 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 SLC45A4Q5BKX6 768 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 PLA2G2CQ5R387 149 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 ZSCAN30Q86W11 494 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 TRIM69Q86WT6 500 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 HORMAD1Q86X24 394 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 PAF1Q8N7H5 531 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 CNTD1Q8N815 330 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 HTR3CQ8WXA8 447 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 SNX19Q92543 992 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 FEM1CQ96JP0 617 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 TEKT5Q96M29 485 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 QKIQ96PU8 341 aaKnown RBP eCLIP10.93□□□□□ -0.66
ATG4B-219ENST00000479941 TMEM74BQ9NUR3 256 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 SEPT10Q9P0V9 454 aa10.93□□□□□ -0.66
ATG4B-219ENST00000479941 CFAP54Q96N23 3096 aa10.92□□□□□ -0.66
ATG4B-219ENST00000479941 A0A1W2PPC4 97 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms