RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 SCN4BQ8IWT1 228 aa19.34■□□□□ 0.69
TNFRSF8-204ENST00000479933 STYXQ8WUJ0 223 aa19.34■□□□□ 0.69
TNFRSF8-204ENST00000479933 SCYL1Q96KG9 808 aa19.34■□□□□ 0.69
TNFRSF8-204ENST00000479933 C8orf48Q96LL4 319 aa19.34■□□□□ 0.69
TNFRSF8-204ENST00000479933 VTI1BQ9UEU0 232 aa19.34■□□□□ 0.69
TNFRSF8-204ENST00000479933 RUVBL2Q9Y230 463 aaKnown RBP19.34■□□□□ 0.69
TNFRSF8-204ENST00000479933 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 GOLGA8TH3BQL2 631 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 HNRNPCP07910 306 aaKnown RBP eCLIP19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 SLC35E2BP0CK96 405 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 UQCRBP14927 111 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 FLT3LGP49771 235 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 NDST2P52849 883 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 PRKAA1Q13131 559 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 MED21Q13503 144 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 TRIM71Q2Q1W2 868 aaKnown RBP19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 ARTNQ5T4W7 220 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 CCSAPQ6IQ19 270 aaPredicted RBP19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 DUS1LQ6P1R4 473 aaKnown RBP19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 RANBP10Q6VN20 620 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 KIAA0408Q6ZU52 694 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 ACVR1CQ8NER5 493 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 PRICKLE1Q96MT3 831 aaPredicted RBP19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 PANX3Q96QZ0 392 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 YIPF2Q9BWQ6 316 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 EBF3Q9H4W6 596 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 NMUR1Q9HB89 426 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 RGS18Q9NS28 235 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 IPO11Q9UI26 975 aaKnown RBP19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 GABRQQ9UN88 632 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 PLXNA3P51805 1871 aa19.33■□□□□ 0.69
TNFRSF8-204ENST00000479933 A0A088AWK7 358 aa19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 MOCS2O96007 188 aaPredicted RBP19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 STMN1P16949 149 aa19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 RENBPP51606 427 aa19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 EMP3P54852 163 aa19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 PLOD1Q02809 727 aaPredicted RBP19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 CACNB2Q08289 660 aaPredicted RBP19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 DCTN2Q13561 401 aaKnown RBP19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 MAP3K21Q5TCX8 1036 aa19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 VWA5B1Q5TIE3 1220 aa19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 NUP93Q8N1F7 819 aa19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 UMODL1-AS1Q8N2C9 162 aa19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 SLC25A51Q9H1U9 297 aa19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 TREX1Q9NSU2 369 aa19.33■□□□□ 0.68
TNFRSF8-204ENST00000479933 A0A087X1B8 175 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 FAM95CA0A1B0GW59 222 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 VILLO15195 856 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 SLC22A2O15244 555 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 HDAC3O15379 428 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 CCNT2O60583 730 aaKnown RBP19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 PMPCBO75439 489 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 F7P08709 466 aaPredicted RBP19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 GABRB3P28472 473 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 NUMBP49757 651 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 RPL14P50914 215 aaKnown RBP19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 LRRC8EQ6NSJ5 796 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 ESRP1Q6NXG1 681 aaKnown RBP19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 SATL1Q86VE3 508 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 SLC41A1Q8IVJ1 513 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 TMEM151AQ8N4L1 468 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 C2CD4AQ8NCU7 369 aaPredicted RBP19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 CALML6Q8TD86 181 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 ACTRT2Q8TDY3 377 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 PDCD6IPQ8WUM4 868 aaKnown RBP19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 GAB3Q8WWW8 586 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 ARNT2Q9HBZ2 717 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 TCF7L2Q9NQB0 619 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 ABI2Q9NYB9 513 aaPredicted RBP19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 FRMPD3Q5JV73 1810 aa19.32■□□□□ 0.68
TNFRSF8-204ENST00000479933 CCDC78A2IDD5 438 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 MATN2O00339 956 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 PHGDHO43175 533 aaKnown RBP19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 CDK4P11802 303 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 RHOQP17081 205 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 SAT1P21673 171 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 GRIA4P48058 902 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 PSMD7P51665 324 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 DSC1Q08554 894 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 BTG3Q14201 252 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 SEL1L3Q68CR1 1132 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 KCTD4Q8WVF5 259 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 SLC39A13Q96H72 371 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 ZNF419Q96HQ0 510 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 CLPTM1LQ96KA5 538 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 MRGPRX2Q96LB1 330 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 RANBP9Q96S59 729 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 PLK2Q9NYY3 685 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 ARHGAP26Q9UNA1 814 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 HEATR9A2RTY3 570 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 MEI4A8MW99 385 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 GLDCP23378 1020 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 MAGEA11P43364 429 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 RPL5P46777 297 aaKnown RBP19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 SLC25A3Q00325 362 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 POU4F1Q01851 419 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 ITGA7Q13683 1181 aa19.31■□□□□ 0.68
TNFRSF8-204ENST00000479933 NCCRP1Q6ZVX7 275 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms