RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 ERVW-1Q9UQF0 538 aa11.33□□□□□ -0.6
APTX-223ENST00000479656 SLC27A6Q9Y2P4 619 aa11.33□□□□□ -0.6
APTX-223ENST00000479656 RAI2Q9Y5P3 530 aa11.33□□□□□ -0.6
APTX-223ENST00000479656 NUMBLQ9Y6R0 609 aa11.33□□□□□ -0.6
APTX-223ENST00000479656 RPS6KL1Q9Y6S9 549 aa11.33□□□□□ -0.6
APTX-223ENST00000479656 CXorf51AA0A1B0GTR3 108 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 EXOC1LA0A1B0GW35 172 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 CCDC78A2IDD5 438 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 GOLGA6L10A6NI86 522 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 PRRT4C9JH25 899 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 BNIP3LO60238 219 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 SPAG6O75602 509 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 PRLP01236 227 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 POLBP06746 335 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 PDHA1P08559 390 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 GSTA2P09210 222 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 GKP32189 559 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 GJA4P35212 333 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 MSLNQ13421 630 aaPredicted RBP11.32□□□□□ -0.6
APTX-223ENST00000479656 SLC14A2Q15849 920 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 TTMPQ5BVD1 217 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 KCTD16Q68DU8 428 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 GRAMD4Q6IC98 578 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 TRMT10BQ6PF06 316 aaKnown RBP11.32□□□□□ -0.6
APTX-223ENST00000479656 MTSS1LQ765P7 747 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 UNC5BQ8IZJ1 945 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 RYBPQ8N488 228 aaPredicted RBP11.32□□□□□ -0.6
APTX-223ENST00000479656 GSDMBQ8TAX9 411 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 PDCD6IPQ8WUM4 868 aaKnown RBP11.32□□□□□ -0.6
APTX-223ENST00000479656 MFSD3Q96ES6 412 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 ZNF778Q96MU6 729 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 TRIB3Q96RU7 358 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 NAT9Q9BTE0 207 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 TDRD1Q9BXT4 1180 aaKnown RBP11.32□□□□□ -0.6
APTX-223ENST00000479656 ACSS3Q9H6R3 686 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 UBE2ZQ9H832 354 aaPredicted RBP11.32□□□□□ -0.6
APTX-223ENST00000479656 MED4Q9NPJ6 270 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 TRIOBPQ9H2D6 2365 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 MBTPS2O43462 519 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 TCEA3O75764 348 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 NDST3O95803 873 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 C1QAP02745 245 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 HLA-DPA1P20036 260 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 NMBRP28336 390 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 GCAP28676 217 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 OAS2P29728 719 aaKnown RBP11.32□□□□□ -0.6
APTX-223ENST00000479656 OPRD1P41143 372 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 CSNK1DP48730 415 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 SNRPD1P62314 119 aaKnown RBP11.32□□□□□ -0.6
APTX-223ENST00000479656 KDSRQ06136 332 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 TRAF2Q12933 501 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 CRYMQ14894 314 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 KBTBD12Q3ZCT8 623 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 ANKRD20A4Q4UJ75 823 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 STEAP4Q687X5 459 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 C22orf39Q6P5X5 142 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 PKN3Q6P5Z2 889 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 TMEM135Q86UB9 458 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 CAMK1DQ8IU85 385 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 OR2AP1Q8NGE2 309 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 WFIKKN2Q8TEU8 576 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 NXPE3Q969Y0 559 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 ISG20Q96AZ6 181 aaKnown RBP11.32□□□□□ -0.6
APTX-223ENST00000479656 ZNF669Q96BR6 464 aaPredicted RBP11.32□□□□□ -0.6
APTX-223ENST00000479656 RMDN1Q96DB5 314 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 MRGPRX3Q96LB0 322 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 CYTH2Q99418 400 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 KIFC1Q9BW19 673 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 SMYD2Q9NRG4 433 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 ELOVL2Q9NXB9 296 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 MOCS1Q9NZB8 636 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 OGFRQ9NZT2 677 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 CTNNAL1Q9UBT7 734 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 TBK1Q9UHD2 729 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 SOX13Q9UN79 622 aa11.32□□□□□ -0.6
APTX-223ENST00000479656 ARIH1Q9Y4X5 557 aaPredicted RBP11.32□□□□□ -0.6
APTX-223ENST00000479656 DENND4AQ7Z401 1863 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 FAM237BA0A1B0GVD1 139 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 CXorf49A8MYA2 514 aaPredicted RBP11.31□□□□□ -0.6
APTX-223ENST00000479656 TTC34A8MYJ7 566 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 C2CD4DB7Z1M9 353 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 GOLGA8KD6RF30 607 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 ANHXE9PGG2 379 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 USP1O94782 785 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 IGSF6O95976 241 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 PRKCGP05129 697 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 ATP5BP06576 529 aaKnown RBP11.31□□□□□ -0.6
APTX-223ENST00000479656 PRKCHP24723 683 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 ADRA1DP25100 572 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 SLC8A1P32418 973 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 STX2P32856 288 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 NNMTP40261 264 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 AP1S1P61966 158 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 HTR4Q13639 388 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 SEPT6Q14141 434 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 SMAD1Q15797 465 aaKnown RBP11.31□□□□□ -0.6
APTX-223ENST00000479656 PTPRNQ16849 979 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 KLHL38Q2WGJ6 581 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 MYLK3Q32MK0 819 aa11.31□□□□□ -0.6
APTX-223ENST00000479656 ITPRIPL2Q3MIP1 535 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms