RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX56-210ENST00000479440 ATP6V1DQ9Y5K8 247 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 TMEM110-MUSTN1A8MSY1 372 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 GNA14O95837 355 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 UGT2B4P06133 528 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 HTR1BP28222 390 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 USP8P40818 1118 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 PEX5P50542 639 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 GNA12Q03113 381 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 TMEM164Q5U3C3 297 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 ZFAND4Q86XD8 727 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 HID1Q8IV36 788 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 TRIM59Q8IWR1 403 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 TP53I13Q8NBR0 393 aaPredicted RBP16.31■□□□□ 0.2
DDX56-210ENST00000479440 OR2AP1Q8NGE2 309 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 ATL2Q8NHH9 583 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 ZYG11BQ9C0D3 744 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 ANLNQ9NQW6 1124 aa16.31■□□□□ 0.2
DDX56-210ENST00000479440 AKAP7Q9P0M2 348 aaPredicted RBP16.31■□□□□ 0.2
DDX56-210ENST00000479440 HOOK1Q9UJC3 728 aaKnown RBP16.31■□□□□ 0.2
DDX56-210ENST00000479440 KIF26BQ2KJY2 2108 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 BICDL2A1A5D9 508 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 I6L893 689 aaPredicted RBP16.3■□□□□ 0.2
DDX56-210ENST00000479440 KRIT1O00522 736 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 AREL1O15033 823 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 SRGAP2O75044 1071 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 GSRP00390 522 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 GKP32189 559 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 MAPK10P53779 464 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 SNRPD1P62314 119 aaKnown RBP16.3■□□□□ 0.2
DDX56-210ENST00000479440 CLCA4Q14CN2 919 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 IRF4Q15306 451 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 PTPN20Q4JDL3 420 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 DTX1Q86Y01 620 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 WDTC1Q8N5D0 677 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 SPATA20Q8TB22 786 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 ZNF564Q8TBZ8 553 aaPredicted RBP16.3■□□□□ 0.2
DDX56-210ENST00000479440 HTR3CQ8WXA8 447 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 B3GNT4Q9C0J1 378 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 MBNL1Q9NR56 388 aaKnown RBP16.3■□□□□ 0.2
DDX56-210ENST00000479440 FOXJ2Q9P0K8 574 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 APPL1Q9UKG1 709 aa16.3■□□□□ 0.2
DDX56-210ENST00000479440 RP1P56715 2156 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.29■□□□□ 0.2
DDX56-210ENST00000479440 STMND1H3BQB6 276 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 MMP20O60882 483 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 PNLIPP16233 465 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 GLB1P16278 677 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 ATP1A2P50993 1020 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 CYP4F2P78329 520 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 ZFP36L1Q07352 338 aaKnown RBP16.29■□□□□ 0.2
DDX56-210ENST00000479440 NFATC4Q14934 902 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 TCEA2Q15560 299 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 ARHGAP44Q17R89 818 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 ALG11Q2TAA5 492 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 KLHL40Q2TBA0 621 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 MAP9Q49MG5 647 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 KLHL10Q6JEL2 608 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 TTI2Q6NXR4 508 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 BORAQ6PGQ7 559 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 FOXR2Q6PJQ5 311 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 DRC7Q8IY82 874 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 FMR1NBQ8N0W7 255 aaPredicted RBP16.29■□□□□ 0.2
DDX56-210ENST00000479440 ARHGEF2Q92974 986 aaKnown RBP16.29■□□□□ 0.2
DDX56-210ENST00000479440 USP7Q93009 1102 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 KLHL32Q96NJ5 620 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 HAPLN3Q96S86 360 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 EPN3Q9H201 632 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 PPARGC1AQ9UBK2 798 aaKnown RBP16.29■□□□□ 0.2
DDX56-210ENST00000479440 ZNF212Q9UDV6 495 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 KLQ9UEF7 1012 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 ACTL7AQ9Y615 435 aa16.29■□□□□ 0.2
DDX56-210ENST00000479440 BECN2A8MW95 431 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 C9orf172C9J069 976 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 POP4O95707 220 aaKnown RBP16.28■□□□□ 0.2
DDX56-210ENST00000479440 TFE3P19532 575 aaPredicted RBP16.28■□□□□ 0.2
DDX56-210ENST00000479440 WT1P19544 449 aaPredicted RBP16.28■□□□□ 0.2
DDX56-210ENST00000479440 KRT9P35527 623 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 ETV5P41161 510 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 MARSP56192 900 aaKnown RBP16.28■□□□□ 0.2
DDX56-210ENST00000479440 RNASE9P60153 205 aaKnown RBP16.28■□□□□ 0.2
DDX56-210ENST00000479440 PTK2Q05397 1052 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 RAD51Q06609 339 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 KCNAB2Q13303 367 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 LRRC14Q15048 493 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 SLC25A52Q3SY17 297 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 LRRC73Q5JTD7 316 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 CERCAMQ5T4B2 595 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 PHF19Q5T6S3 580 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 ENPP7Q6UWV6 458 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 GDPD4Q6W3E5 623 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 TTC7BQ86TV6 843 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 Q8N9G6 341 aaPredicted RBP16.28■□□□□ 0.2
DDX56-210ENST00000479440 GPR156Q8NFN8 814 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 NT5C3BQ969T7 300 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 TSACCQ96A04 125 aaPredicted RBP16.28■□□□□ 0.2
DDX56-210ENST00000479440 TBCBQ99426 244 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 TUBD1Q9UJT1 453 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 HPCAL4Q9UM19 191 aa16.28■□□□□ 0.2
DDX56-210ENST00000479440 RNF215Q9Y6U7 377 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms