RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 MEI4A8MW99 385 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 TBC1D3LB9A6J9 549 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 SOCS5O75159 536 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 GJB3O75712 270 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 HLA-DQB2P05538 268 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 TBC1D3HP0C7X1 549 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 PTGER3P43115 390 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 SUOXP51687 545 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 ZBTB17Q13105 803 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 WDR45BQ5MNZ6 344 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 TBC1D3GQ6DHY5 549 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 TBC1D3CQ6IPX1 549 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 B4GALNT4Q76KP1 1039 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 ARMCX6Q7L4S7 300 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 CYP2U1Q7Z449 544 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 TBC1D3Q8IZP1 549 aaPredicted RBP25.27■■□□□ 1.64
PERM1-203ENST00000479361 SLC35F6Q8N357 371 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 FAM122AQ96E09 287 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 VAT1Q99536 393 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 C6orf106Q9H6K1 298 aaPredicted RBP25.27■■□□□ 1.64
PERM1-203ENST00000479361 DMDP11532 3685 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 A0A1W2PQ67 120 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 ENC1O14682 589 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 AP1G1O43747 822 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 EPN2O95208 641 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 RBP3P10745 1247 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 XPAP23025 273 aaPredicted RBP25.26■■□□□ 1.63
PERM1-203ENST00000479361 TEX44Q53QW1 395 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 KIAA0895LQ68EN5 471 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 NEK5Q6P3R8 708 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 TTC7BQ86TV6 843 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 SLC13A5Q86YT5 568 aaPredicted RBP25.26■■□□□ 1.63
PERM1-203ENST00000479361 SLC41A1Q8IVJ1 513 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 ABCA7Q8IZY2 2146 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 HTR3CQ8WXA8 447 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 AGAP3Q96P47 875 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 SPAG17Q6Q759 2223 aa25.26■■□□□ 1.63
PERM1-203ENST00000479361 TSPAN11A1L157 253 aa25.25■■□□□ 1.63
PERM1-203ENST00000479361 TTC24A2A3L6 582 aaPredicted RBP25.25■■□□□ 1.63
PERM1-203ENST00000479361 PTPN3P26045 913 aa25.25■■□□□ 1.63
PERM1-203ENST00000479361 TAS2R38P59533 333 aa25.25■■□□□ 1.63
PERM1-203ENST00000479361 POLR2LP62875 67 aaKnown RBP25.25■■□□□ 1.63
PERM1-203ENST00000479361 CREB5Q02930 508 aa25.25■■□□□ 1.63
PERM1-203ENST00000479361 DARS2Q6PI48 645 aaKnown RBP25.25■■□□□ 1.63
PERM1-203ENST00000479361 CNTD1Q8N815 330 aa25.25■■□□□ 1.63
PERM1-203ENST00000479361 RUBCNQ92622 972 aa25.25■■□□□ 1.63
PERM1-203ENST00000479361 ECHDC3Q96DC8 303 aa25.25■■□□□ 1.63
PERM1-203ENST00000479361 FRMD8P1Q9BZ68 369 aaPredicted RBP25.25■■□□□ 1.63
PERM1-203ENST00000479361 KCND1Q9NSA2 647 aa25.25■■□□□ 1.63
PERM1-203ENST00000479361 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.25■■□□□ 1.63
PERM1-203ENST00000479361 THADAQ6YHU6 1953 aa25.25■■□□□ 1.63
PERM1-203ENST00000479361 BCLAF3A2AJT9 711 aaKnown RBP25.24■■□□□ 1.63
PERM1-203ENST00000479361 NEMP1O14524 444 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 STK10O94804 968 aaKnown RBP25.24■■□□□ 1.63
PERM1-203ENST00000479361 FSBPO95073 299 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 SERPINF2P08697 491 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 CA4P22748 312 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 HOXD12P35452 270 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 CCR5P51681 352 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 DSC2Q02487 901 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 ASCL5Q7RTU5 278 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 RGL4Q8IZJ4 473 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.24■■□□□ 1.63
PERM1-203ENST00000479361 MAIP1Q8WWC4 291 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 BIRC7Q96CA5 298 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 TEKT5Q96M29 485 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 CEP41Q9BYV8 373 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 TRHDEQ9UKU6 1024 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 PCDHGC4Q9Y5F7 938 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 FADS3Q9Y5Q0 445 aa25.24■■□□□ 1.63
PERM1-203ENST00000479361 TCRBV7S2A1N4TA0A589 114 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 UPK3BL1B0FP48 263 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 UPK3BL2E5RIL1 263 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 TRAFD1O14545 582 aaPredicted RBP25.23■■□□□ 1.63
PERM1-203ENST00000479361 HTRA2O43464 458 aaPredicted RBP25.23■■□□□ 1.63
PERM1-203ENST00000479361 TSPAN6O43657 245 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 CEP104O60308 925 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 TIMP2P16035 220 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 ITPKAP23677 461 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 RBL1P28749 1068 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 CXCR5P32302 372 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 PLA2G5P39877 138 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 WASHC5Q12768 1159 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 UGP2Q16851 508 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 ZSCAN30Q86W11 494 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 TRIM69Q86WT6 500 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 SYT12Q8IV01 421 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 ARRDC2Q8TBH0 407 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 PDCD6IPQ8WUM4 868 aaKnown RBP25.23■■□□□ 1.63
PERM1-203ENST00000479361 DNASE2BQ8WZ79 361 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 SNX19Q92543 992 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 SPOCK2Q92563 424 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 PIGKQ92643 395 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 PBKQ96KB5 322 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 FAM118BQ9BPY3 351 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 HINFPQ9BQA5 517 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 ARRDC1-AS1Q9H2J1 176 aa25.23■■□□□ 1.63
PERM1-203ENST00000479361 KLHL8Q9P2G9 620 aaPredicted RBP25.23■■□□□ 1.63
PERM1-203ENST00000479361 PCDH8O95206 1070 aa25.22■■□□□ 1.63
PERM1-203ENST00000479361 NFKBIAP25963 317 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms