RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 USP46P62068 366 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 USP10Q14694 798 aaKnown RBP27.8■■■□□ 2.04
CHKB-208ENST00000479003 LIPMQ5VYY2 423 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 SLC8B1Q6J4K2 584 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 KIAA1841Q6NSI8 718 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 ZNF419Q96HQ0 510 aaPredicted RBP27.8■■■□□ 2.04
CHKB-208ENST00000479003 TSNARE1Q96NA8 513 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 ZNF184Q99676 751 aaPredicted RBP27.8■■■□□ 2.04
CHKB-208ENST00000479003 SEPT5Q99719 369 aaPredicted RBP27.8■■■□□ 2.04
CHKB-208ENST00000479003 DRC3Q9H069 523 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 ILKAPQ9H0C8 392 aaPredicted RBP27.8■■■□□ 2.04
CHKB-208ENST00000479003 CATSPERBQ9H7T0 1116 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 MATN3O15232 486 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 ZBTB14O43829 449 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 PAGE1O75459 146 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 MT-CYBP00156 380 aaPredicted RBP27.8■■■□□ 2.04
CHKB-208ENST00000479003 GABRB3P28472 473 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 DUSP4Q13115 394 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 UGP2Q16851 508 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 MGAT5BQ3V5L5 792 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 ARTNQ5T4W7 220 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 DENND5AQ6IQ26 1287 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 ADGRG6Q86SQ4 1221 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 KBTBD2Q8IY47 623 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 NUP93Q8N1F7 819 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 SHKBP1Q8TBC3 707 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 SPPL2BQ8TCT7 592 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 SLC39A8Q9C0K1 460 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 NDE1Q9NXR1 346 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 RAP2CQ9Y3L5 183 aa27.8■■■□□ 2.04
CHKB-208ENST00000479003 NYNRINQ9P2P1 1898 aaKnown RBP27.8■■■□□ 2.04
CHKB-208ENST00000479003 CCDC78A2IDD5 438 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 EIF4E1BA6NMX2 242 aaKnown RBP27.79■■■□□ 2.04
CHKB-208ENST00000479003 DCXO43602 365 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 AHSGP02765 367 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 COL6A2P12110 1019 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 COX4I1P13073 169 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 SYN1P17600 705 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 GLDCP23378 1020 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 OR1D2P34982 312 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 POLD2P49005 469 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 HK2P52789 917 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 KLF10Q13118 480 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 SLC12A1Q13621 1099 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP27.79■■■□□ 2.04
CHKB-208ENST00000479003 SLC25A41Q8N5S1 370 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 SMOC2Q9H3U7 446 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 TK2O00142 265 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 PHGDHO43175 533 aaKnown RBP27.79■■■□□ 2.04
CHKB-208ENST00000479003 GJB5O95377 273 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 SLC35E2BP0CK96 405 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 ITGAXP20702 1163 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 GEMP55040 296 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 LBRQ14739 615 aaKnown RBP27.79■■■□□ 2.04
CHKB-208ENST00000479003 SCD5Q86SK9 330 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 IPMKQ8NFU5 416 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 PPP1R2P1Q96PQ5 205 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 FICDQ9BVA6 458 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 MAN1C1Q9NR34 630 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 PPM1HQ9ULR3 514 aa27.79■■■□□ 2.04
CHKB-208ENST00000479003 MATN2O00339 956 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 ADRA1AP35348 466 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 PPP2R5DQ14738 602 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 TMEM240Q5SV17 173 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 BTBD8Q5XKL5 378 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 FRMD7Q6ZUT3 714 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 PPHLN1Q8NEY8 458 aaKnown RBP27.78■■■□□ 2.04
CHKB-208ENST00000479003 STYXQ8WUJ0 223 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 PTCD2Q8WV60 388 aaKnown RBP27.78■■■□□ 2.04
CHKB-208ENST00000479003 SPDL1Q96EA4 605 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 CLSTN3Q9BQT9 956 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 SHCBP1LQ9BZQ2 653 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 NMUR1Q9HB89 426 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 MRM3Q9HC36 420 aaKnown RBP27.78■■■□□ 2.04
CHKB-208ENST00000479003 S100A14Q9HCY8 104 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 TCF7L2Q9NQB0 619 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 SPG21Q9NZD8 308 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 CDH22Q9UJ99 828 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 BACE2Q9Y5Z0 518 aa27.78■■■□□ 2.04
CHKB-208ENST00000479003 E9PBE3 544 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 KLHL41O60662 606 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 CHRNGP07510 517 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 PAX7P23759 505 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 MPSTP25325 297 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 CCR1P32246 355 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 SMARCB1Q12824 385 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 POU6F1Q14863 301 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 POTEHQ6S545 545 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 OR52B2Q96RD2 323 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 RUVBL2Q9Y230 463 aaKnown RBP27.77■■■□□ 2.04
CHKB-208ENST00000479003 TCAF1Q9Y4C2 921 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 SAT1P21673 171 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 GRIA4P48058 902 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 ARCN1P48444 511 aaKnown RBP27.77■■■□□ 2.04
CHKB-208ENST00000479003 ERFP50548 548 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 SLC41A1Q8IVJ1 513 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 CENPLQ8N0S6 344 aaPredicted RBP27.77■■■□□ 2.04
CHKB-208ENST00000479003 KCTD4Q8WVF5 259 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 TTC1Q99614 292 aa27.77■■■□□ 2.04
CHKB-208ENST00000479003 ENTPD7Q9NQZ7 604 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms