RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 PDILTQ8N807 584 aa12.4□□□□□ -0.42
HDAC8-217ENST00000478743 SEMA4DQ92854 862 aa12.4□□□□□ -0.42
HDAC8-217ENST00000478743 HAPLN3Q96S86 360 aa12.4□□□□□ -0.42
HDAC8-217ENST00000478743 RBM15Q96T37 977 aaKnown RBP eCLIP12.4□□□□□ -0.42
HDAC8-217ENST00000478743 SRRTQ9BXP5 876 aaKnown RBP12.4□□□□□ -0.42
HDAC8-217ENST00000478743 INTS2Q9H0H0 1204 aaKnown RBP12.4□□□□□ -0.42
HDAC8-217ENST00000478743 DMAC2Q9NW81 257 aa12.4□□□□□ -0.42
HDAC8-217ENST00000478743 ZNF469Q96JG9 3925 aaPredicted RBP12.39□□□□□ -0.43
HDAC8-217ENST00000478743 CDC14CA4D256 554 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 MMP20O60882 483 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 STK17BO94768 372 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 DLGAP3O95886 979 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 CALCAP01258 141 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 PDCP20941 246 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 ALDH4A1P30038 563 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 SRP54P61011 504 aaKnown RBP12.39□□□□□ -0.43
HDAC8-217ENST00000478743 YPEL5P62699 121 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 MC1RQ01726 317 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 CCDC15Q0P6D6 951 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 DCAF12Q5T6F0 453 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 FBXL22Q6P050 247 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 PMF1Q6P1K2 205 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 KDELC2Q7Z4H8 507 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 ZNF438Q7Z4V0 828 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 FAM186BQ8IYM0 893 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 AGBL5Q8NDL9 886 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 FAM46DQ8NEK8 389 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 OR6K2Q8NGY2 324 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 PATE1Q8WXA2 126 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 ASB12Q8WXK4 309 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 KCTD13Q8WZ19 329 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 OR1E3Q8WZA6 343 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 EEF2KMTQ96G04 330 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 PPP1R16AQ96I34 528 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 SERPINB11Q96P15 392 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 SLC29A3Q9BZD2 475 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 MMRN2Q9H8L6 949 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 MRPL40Q9NQ50 206 aaKnown RBP12.39□□□□□ -0.43
HDAC8-217ENST00000478743 POLHQ9Y253 713 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 COQ6Q9Y2Z9 468 aa12.39□□□□□ -0.43
HDAC8-217ENST00000478743 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
HDAC8-217ENST00000478743 NUDT21O43809 227 aaKnown RBP12.38□□□□□ -0.43
HDAC8-217ENST00000478743 LEPRP48357 1165 aaKnown RBP12.38□□□□□ -0.43
HDAC8-217ENST00000478743 CEP135Q66GS9 1140 aa12.38□□□□□ -0.43
HDAC8-217ENST00000478743 JMJD6Q6NYC1 403 aaPredicted RBP12.38□□□□□ -0.43
HDAC8-217ENST00000478743 ZSWIM1Q9BR11 485 aa12.38□□□□□ -0.43
HDAC8-217ENST00000478743 ASPSCR1Q9BZE9 553 aa12.38□□□□□ -0.43
HDAC8-217ENST00000478743 MIS12Q9H081 205 aa12.38□□□□□ -0.43
HDAC8-217ENST00000478743 SLC39A2Q9NP94 309 aa12.38□□□□□ -0.43
HDAC8-217ENST00000478743 KLQ9UEF7 1012 aa12.38□□□□□ -0.43
HDAC8-217ENST00000478743 CROTQ9UKG9 612 aa12.38□□□□□ -0.43
HDAC8-217ENST00000478743 TMEM184BQ9Y519 407 aaPredicted RBP12.38□□□□□ -0.43
HDAC8-217ENST00000478743 OR1A2Q9Y585 309 aa12.38□□□□□ -0.43
HDAC8-217ENST00000478743 RPS6KL1Q9Y6S9 549 aa12.38□□□□□ -0.43
HDAC8-217ENST00000478743 B4E171 279 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 PRSS44E7EML9 344 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 O00370 1275 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 EIF5BO60841 1220 aaKnown RBP12.37□□□□□ -0.43
HDAC8-217ENST00000478743 APOEP02649 317 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 ZNF28P17035 718 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 BMP6P22004 513 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 CSTF2P33240 577 aaKnown RBP eCLIP12.37□□□□□ -0.43
HDAC8-217ENST00000478743 TSPAN7P41732 249 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 BLKP51451 505 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 CCNHP51946 323 aaPredicted RBP12.37□□□□□ -0.43
HDAC8-217ENST00000478743 SLC8A3P57103 927 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 NUCB2P80303 420 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 NNTQ13423 1086 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 NFATC4Q14934 902 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 NR1D2Q14995 579 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 KLHL40Q2TBA0 621 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 ZRANB3Q5FWF4 1079 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 SLC6A19Q695T7 634 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 SPNS3Q6ZMD2 512 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 CCDC73Q6ZRK6 1079 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 TAF8Q7Z7C8 310 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 CCDC112Q8NEF3 446 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 TMC2Q8TDI7 906 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 IRGQQ8WZA9 623 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 BTN2A3PQ96KV6 586 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 CCDC114Q96M63 670 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 EFHD1Q9BUP0 239 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 TMEM168Q9H0V1 697 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 ZDHHC6Q9H6R6 413 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 FGF22Q9HCT0 170 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 ASF1BQ9NVP2 202 aa12.37□□□□□ -0.43
HDAC8-217ENST00000478743 A0A0D9SEW6 157 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 C16orf96A6NNT2 1141 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 NEMP1O14524 444 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 TSPAN6O43657 245 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 IGLV3-25P01717 112 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 DLSTP36957 453 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 PGDP52209 483 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 KRTAP10-9P60411 292 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 SNRPFP62306 86 aaKnown RBP12.36□□□□□ -0.43
HDAC8-217ENST00000478743 SEMA5AQ13591 1074 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 KNOP1Q1ED39 458 aaKnown RBP12.36□□□□□ -0.43
HDAC8-217ENST00000478743 WSCD2Q2TBF2 565 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 ALFQ53S48 1182 aa12.36□□□□□ -0.43
HDAC8-217ENST00000478743 C17orf82Q86X59 251 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms