RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 HECAQ9UBI9 543 aaPredicted RBP10.12□□□□□ -0.79
SCAMP3-206ENST00000478737 IL36AQ9UHA7 158 aa10.12□□□□□ -0.79
SCAMP3-206ENST00000478737 EIF2B4Q9UI10 523 aaKnown RBP10.12□□□□□ -0.79
SCAMP3-206ENST00000478737 CDV3Q9UKY7 258 aaKnown RBP10.12□□□□□ -0.79
SCAMP3-206ENST00000478737 PACSIN2Q9UNF0 486 aaPredicted RBP10.12□□□□□ -0.79
SCAMP3-206ENST00000478737 THADAQ6YHU6 1953 aa10.12□□□□□ -0.79
SCAMP3-206ENST00000478737 CCDC66A2RUB6 948 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 MIF4GDA9UHW6 222 aaKnown RBP10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 UPK3BL1B0FP48 263 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 UPK3BL2E5RIL1 263 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 J3KR12 359 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 MFSD11O43934 449 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 BNIP3LO60238 219 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 GJB3O75712 270 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 TMCC1O94876 653 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 PEX11BO96011 259 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 ENGP17813 658 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 KDELR1P24390 212 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 ITGB7P26010 798 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 NUDT1P36639 197 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 AFF3P51826 1226 aaKnown RBP10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 SNRPD1P62314 119 aaKnown RBP10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 RACK1P63244 317 aaKnown RBP10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 IL10RBQ08334 325 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 NSUN2Q08J23 767 aaKnown RBP eCLIP10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 RFTN1Q14699 578 aaPredicted RBP10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 ANKRD20A8PQ5CZ79 823 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 ERN2Q76MJ5 926 aaKnown RBP10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 TRIM69Q86WT6 500 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 VSIG1Q86XK7 387 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 RFX6Q8HWS3 928 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 CREG2Q8IUH2 290 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 LRRC49Q8IUZ0 686 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 UBL4BQ8N7F7 174 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 NOA1Q8NC60 698 aaKnown RBP10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 OR14C36Q8NHC7 312 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 HCAR2Q8TDS4 363 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 ARRDC3Q96B67 414 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 PPP1R16AQ96I34 528 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 RBM41Q96IZ5 413 aaKnown RBP10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 CELF6Q96J87 481 aaKnown RBP10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 GDAP1L1Q96MZ0 367 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 EDEM2Q9BV94 578 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 TLR10Q9BXR5 811 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 OSBPL1AQ9BXW6 950 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 VIPAS39Q9H9C1 493 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 PREBQ9HCU5 417 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 TMEM9BQ9NQ34 198 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 ETNK2Q9NVF9 386 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 DNAAF2Q9NVR5 837 aaKnown RBP10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 DKK3Q9UBP4 350 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 LHX3Q9UBR4 397 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 SLCO1B1Q9Y6L6 691 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 SPTBN2O15020 2390 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 LRRK1Q38SD2 2015 aa10.11□□□□□ -0.79
SCAMP3-206ENST00000478737 ATXN2Q99700 1313 aaKnown RBP10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 TNRC6BQ9UPQ9 1833 aaKnown RBP10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 TBC1D3DA0A087WVF3 549 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 TBC1D3IA0A087WXS9 549 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 TBC1D3EA0A087X179 549 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 TBC1D3KA0A087X1G2 549 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 TBC1D3FA6NER0 549 aaPredicted RBP10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 C3orf70A6NLC5 250 aaPredicted RBP10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 C4orf47A7E2U8 309 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 ZNF487B1APH4 448 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 TBC1D3LB9A6J9 549 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 DFFAO00273 331 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 PLK4O00444 970 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 KPNA3O00505 521 aaPredicted RBP10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 APOL1O14791 398 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 AP1G1O43747 822 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 MAFKO60675 156 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 FSBPO95073 299 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 CFIP05156 583 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 SYPP08247 313 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 TBC1D3HP0C7X1 549 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 TNFRSF8P28908 595 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 GRIA4P48058 902 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 VSNL1P62760 191 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 BNC1Q01954 994 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 SLC14A1Q13336 389 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 RPS6KA1Q15418 735 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 ZNF805Q5CZA5 627 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 BEND6Q5SZJ8 279 aaPredicted RBP10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 TMCO4Q5TGY1 634 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 NCBP2-AS2Q69YL0 99 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 TBC1D3GQ6DHY5 549 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 TBC1D3CQ6IPX1 549 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 IL27RAQ6UWB1 636 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 MFSD7Q6UXD7 560 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 LEKR1Q6ZMV7 388 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 SPOCD1Q6ZMY3 1216 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 ERMP1Q7Z2K6 904 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 TP53INP2Q8IXH6 220 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 TBC1D3Q8IZP1 549 aaPredicted RBP10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 ZCCHC9Q8N567 271 aaKnown RBP10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 ATPAF2Q8N5M1 289 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 NETO2Q8NC67 525 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 SPATA4Q8NEY3 305 aa10.1□□□□□ -0.79
SCAMP3-206ENST00000478737 EXD1Q8NHP7 514 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms