RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 CUL5Q93034 780 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 EFHD2Q96C19 240 aaPredicted RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 C1GALT1C1Q96EU7 318 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 MASTLQ96GX5 879 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 RPGRIP1Q96KN7 1286 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 FAM20AQ96MK3 541 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 NLRP4Q96MN2 994 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 FAM111AQ96PZ2 611 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 USP28Q96RU2 1077 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 CDK5RAP1Q96SZ6 601 aaKnown RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 PKP4Q99569 1192 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 ADI1Q9BV57 179 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 CNPPD1Q9BV87 410 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 NUP85Q9BW27 656 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 C1QTNF3Q9BXJ4 246 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 EIF2AQ9BY44 585 aaKnown RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 IFIH1Q9BYX4 1025 aaKnown RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 API5Q9BZZ5 524 aaKnown RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 KLC2Q9H0B6 622 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 SPACA1Q9HBV2 294 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 MRM3Q9HC36 420 aaKnown RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 SARS2Q9NP81 518 aaKnown RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 IL26Q9NPH9 171 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 INTS13Q9NVM9 706 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 DNAJB9Q9UBS3 223 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 POLKQ9UBT6 870 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 HMGXB4Q9UGU5 601 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 PAIP2BQ9ULR5 123 aaKnown RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 PCDHGB4Q9UN71 923 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 MYO3AQ8NEV4 1616 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 MAPK8IP3Q9UPT6 1336 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 KIDINS220Q9ULH0 1771 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 CASKIN1Q8WXD9 1431 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 ATP10AO60312 1499 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ATP7AQ04656 1500 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 TIAM1Q13009 1591 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CLTCQ00610 1675 aaKnown RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 KRTAP4-8A0A0G2JLE6 195 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 KPNA7A9QM74 516 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 KIF28PB7ZC32 967 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 FAM86B1E9PN63 330 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 F8W810 466 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 GCOM1H8Y6P7 765 aaPredicted RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 WDR46O15213 610 aaKnown RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CYP27B1O15528 508 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 B3GALT2O43825 422 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 GJB3O75712 270 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 FAM155BO75949 473 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 GGPS1O95749 300 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CLPTM1O96005 669 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 PENKP01210 267 aaPredicted RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 AFPP02771 609 aaKnown RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 A1BGP04217 495 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ADRB1P08588 477 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 MYZAPP0CAP1 466 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 MYBL1P10243 752 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 PRPS2P11908 318 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 LAMP2P13473 410 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CCDC130P13994 396 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 TSHRP16473 764 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF20P17024 532 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 HOXB8P17481 243 aaPredicted RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CTRB1P17538 263 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CASTP20810 708 aaKnown RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 S100A1P23297 94 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 PCSK1P29120 753 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ALDH4A1P30038 563 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 TM4SF1P30408 202 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 MLH1P40692 756 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CETN2P41208 172 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 HTR2BP41595 481 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 PTGER3P43115 390 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 MCAMP43121 646 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ME1P48163 572 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 HSPA7P48741 367 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ALDH9A1P49189 494 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 POU3F4P49335 361 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 STARP49675 285 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 NT5C2P49902 561 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF81P51508 661 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CCR5P51681 352 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ITGA8P53708 1063 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ATXN3P54252 364 aaPredicted RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 YPEL5P62699 121 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 TRA2BP62995 288 aaKnown RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ADAM17P78536 824 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CBX1P83916 185 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ATP8B2P98198 1209 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 MC1RQ01726 317 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ELP6Q0PNE2 266 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 STK4Q13043 487 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 CHAF1BQ13112 559 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 DNAJC3Q13217 504 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 HERC3Q15034 1050 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 POLD3Q15054 466 aaPredicted RBP3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 ACAP2Q15057 778 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 PFKFB4Q16877 469 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 MPEG1Q2M385 716 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 MYLK3Q32MK0 819 aa3.6□□□□□ -1.83
FNDC3B-209ENST00000478016 LEXMQ3ZCV2 418 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms