RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	BTBD6	Q96KE9	485 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	CNDP2	Q96KP4	475 aa	Known RBP	13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	SUV39H2	Q9H5I1	410 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	SP110	Q9HB58	689 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	KLHL11	Q9NVR0	708 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	GGT7	Q9UJ14	662 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	ITM2B	Q9Y287	266 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	TMEM8B	A6NDV4	472 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	POM121B	A6NF01	834 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	FPGT	O14772	594 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	RARA	P10276	462 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	TCF4	P15884	667 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	TIMP2	P16035	220 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	EIF4A3	P38919	411 aa	Known RBP	13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	CSNK1D	P48730	415 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	SUOX	P51687	545 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	ELP6	Q0PNE2	266 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	RFTN1	Q14699	578 aa	Predicted RBP	13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	CCDC157	Q569K6	752 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	LRRC73	Q5JTD7	316 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	CFAP58	Q5T655	872 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	TMCO3	Q6UWJ1	677 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	KYAT3	Q6YP21	454 aa	Known RBP	13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	KANSL1	Q7Z3B3	1105 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	NPW	Q8N729	165 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	TSEN2	Q8NCE0	465 aa	Known RBP	13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	CXorf40A	Q8TE69	158 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	IFT43	Q96FT9	208 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	BMF	Q96LC9	184 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	ZNF641	Q96N77	438 aa	Predicted RBP	13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	TUBGCP5	Q96RT8	1024 aa		13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	CINP	Q9BW66	212 aa	Predicted RBP	13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	IPO11	Q9UI26	975 aa	Known RBP	13.96	□□□□□ -0.17
HDAC7-222	ENST00000477937	CHD8	Q9HCK8	2581 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	RAD51B	O15315	384 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	SPINT1	O43278	529 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	MMP20	O60882	483 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	SDC3	O75056	442 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	TM7SF2	O76062	418 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	PIGN	O95427	931 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	C1S	P09871	688 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	AMPD1	P23109	780 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	DGKA	P23743	735 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	SSR1	P43307	286 aa	Known RBP	13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	RABIF	P47224	123 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	SLC18A3	Q16572	532 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	HADH	Q16836	314 aa	Known RBP	13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	HS1BP3	Q53T59	392 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	BRAT1	Q6PJG6	821 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	TMPRSS7	Q7RTY8	843 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	SRL	Q86TD4	932 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	CAMK1D	Q8IU85	385 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	SLC22A18AS	Q8N1D0	253 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	GALNT15	Q8N3T1	639 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	KDF1	Q8NAX2	398 aa	Predicted RBP	13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	DENND6B	Q8NEG7	585 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	KLF6	Q99612	283 aa	Predicted RBP	13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	C1QTNF7	Q9BXJ2	289 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	DEF6	Q9H4E7	631 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	ATP13A3	Q9H7F0	1226 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	CTTNBP2NL	Q9P2B4	639 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	PCDHGA1	Q9Y5H4	931 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	MYLK	Q15746	1914 aa		13.95	□□□□□ -0.18
HDAC7-222	ENST00000477937	GOLGA4	Q13439	2230 aa	Known RBP	13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	BUB1B	O60566	1050 aa	Predicted RBP	13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	PIAS2	O75928	621 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	H2AFZ	P0C0S5	128 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	CDK4	P11802	303 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	CKMT2	P17540	419 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	ITIH2	P19823	946 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	SERPINA4	P29622	427 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	SERPINB6	P35237	376 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	RENBP	P51606	427 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	SLC25A11	Q02978	314 aa	Known RBP	13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	KRT81	Q14533	505 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	UGP2	Q16851	508 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	TMEM52B	Q4KMG9	183 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	TXNRD3NB	Q6F5E7	133 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	ERAP2	Q6P179	960 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	ARHGAP36	Q6ZRI8	547 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	H2AFV	Q71UI9	128 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	TP53INP2	Q8IXH6	220 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	SLC25A45	Q8N413	288 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	RNF214	Q8ND24	703 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	CENPT	Q96BT3	561 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	ZNF599	Q96NL3	588 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	CSPG4P5	Q96PW8	444 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	DNAJC7	Q99615	494 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	WRAP53	Q9BUR4	548 aa	Known RBP	13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	GPR27	Q9NS67	375 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	ETNK2	Q9NVF9	386 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	DNAJC28	Q9NX36	388 aa		13.94	□□□□□ -0.18
HDAC7-222	ENST00000477937	UVRAG	Q9P2Y5	699 aa		13.94	□□□□□ -0.18

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