RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 AGBL4Q5VU57 503 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 ANKRD20A3Q5VUR7 823 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 PID1Q7Z2X4 250 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 DSG4Q86SJ6 1040 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 KBTBD6Q86V97 674 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 BBS5Q8N3I7 341 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 ACTRT1Q8TDG2 376 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 GAB3Q8WWW8 586 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 PHOX2BQ99453 314 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 GPR174Q9BXC1 333 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 POLR1EQ9GZS1 481 aaKnown RBP16.04■□□□□ 0.16
COPS3-207ENST00000477299 WSB2Q9NYS7 404 aaPredicted RBP16.04■□□□□ 0.16
COPS3-207ENST00000477299 KLHL8Q9P2G9 620 aaPredicted RBP16.04■□□□□ 0.16
COPS3-207ENST00000477299 ITM2BQ9Y287 266 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 SAR1BQ9Y6B6 198 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 DMDP11532 3685 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 RALGAPA1Q6GYQ0 2036 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 MYLKQ15746 1914 aa16.04■□□□□ 0.16
COPS3-207ENST00000477299 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 PRR23AA6NEV1 266 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 C1QTNF3-AMACRE9PGA6 284 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 PGRMC1O00264 195 aaKnown RBP16.03■□□□□ 0.16
COPS3-207ENST00000477299 RPP40O75818 363 aaKnown RBP16.03■□□□□ 0.16
COPS3-207ENST00000477299 NEBLO76041 1014 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 PRLP01236 227 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 IGLV3-19P01714 112 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 PRLRP16471 622 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 TCP1P17987 556 aaKnown RBP16.03■□□□□ 0.16
COPS3-207ENST00000477299 ITGB7P26010 798 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 HSPA9P38646 679 aaKnown RBP16.03■□□□□ 0.16
COPS3-207ENST00000477299 AP1S1P61966 158 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 ZBTB16Q05516 673 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 RAD51Q06609 339 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 BCL2L1Q07817 233 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 OLIG2Q13516 323 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 USP39Q53GS9 565 aaKnown RBP16.03■□□□□ 0.16
COPS3-207ENST00000477299 FAM46CQ5VWP2 391 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 KDELC2Q7Z4H8 507 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 TMEFF1Q8IYR6 380 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 PDCD6IPQ8WUM4 868 aaKnown RBP16.03■□□□□ 0.16
COPS3-207ENST00000477299 ATOH1Q92858 354 aaPredicted RBP16.03■□□□□ 0.16
COPS3-207ENST00000477299 NKD2Q969F2 451 aaPredicted RBP16.03■□□□□ 0.16
COPS3-207ENST00000477299 FAM131CQ96AQ9 280 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 IMP4Q96G21 291 aaKnown RBP16.03■□□□□ 0.16
COPS3-207ENST00000477299 OXNAD1Q96HP4 312 aaPredicted RBP16.03■□□□□ 0.16
COPS3-207ENST00000477299 FAM126AQ9BYI3 521 aaPredicted RBP16.03■□□□□ 0.16
COPS3-207ENST00000477299 DUSP15Q9H1R2 295 aaPredicted RBP16.03■□□□□ 0.16
COPS3-207ENST00000477299 C6orf106Q9H6K1 298 aaPredicted RBP16.03■□□□□ 0.16
COPS3-207ENST00000477299 ZNF148Q9UQR1 794 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 CHKBQ9Y259 395 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 RAI2Q9Y5P3 530 aa16.03■□□□□ 0.16
COPS3-207ENST00000477299 FAM47DPA6NHR8 397 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 A8MX80 341 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 CES2O00748 559 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 METTL18O95568 372 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 ZSCAN5DPP0CG00 497 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 CD6P30203 668 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 TTC31Q49AM3 519 aaPredicted RBP16.02■□□□□ 0.16
COPS3-207ENST00000477299 FAXCQ5TGI0 409 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 USP30Q70CQ3 517 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 ERN2Q76MJ5 926 aaKnown RBP16.02■□□□□ 0.16
COPS3-207ENST00000477299 ARMCX6Q7L4S7 300 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 SLC41A1Q8IVJ1 513 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 OR14C36Q8NHC7 312 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 TADA1Q96BN2 335 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 ECHDC3Q96DC8 303 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 LRIG1Q96JA1 1093 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 MLPHQ9BV36 600 aaPredicted RBP16.02■□□□□ 0.16
COPS3-207ENST00000477299 SLC25A51Q9H1U9 297 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 ATP13A3Q9H7F0 1226 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 AMACRQ9UHK6 382 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 PCDHB9Q9Y5E1 797 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 PCDHGA2Q9Y5H1 932 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 SLCO1B1Q9Y6L6 691 aa16.02■□□□□ 0.16
COPS3-207ENST00000477299 ADAMTS9Q9P2N4 1935 aa16.02■□□□□ 0.15
COPS3-207ENST00000477299 PI4KAP42356 2102 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 C5orf60A6NFR6 353 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 MAP3K13O43283 966 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 HTRA2O43464 458 aaPredicted RBP16.01■□□□□ 0.15
COPS3-207ENST00000477299 ZNF217O75362 1048 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 PMPCBO75439 489 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 ADRB3P13945 408 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 PSMB4P28070 264 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 SERPINA4P29622 427 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 DEKP35659 375 aaKnown RBP16.01■□□□□ 0.15
COPS3-207ENST00000477299 ADPRHP54922 357 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 PPP2CBP62714 309 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 PPP2CAP67775 309 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 PCSK7Q16549 785 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 PLK5Q496M5 336 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 SYCP2LQ5T4T6 812 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 FBXL19Q6PCT2 694 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 TTC7BQ86TV6 843 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 ZNF592Q92610 1267 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 KLK6Q92876 244 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 MAGOHBQ96A72 148 aaKnown RBP16.01■□□□□ 0.15
COPS3-207ENST00000477299 ZNF641Q96N77 438 aaPredicted RBP16.01■□□□□ 0.15
COPS3-207ENST00000477299 SPATA13Q96N96 652 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 TUBGCP5Q96RT8 1024 aa16.01■□□□□ 0.15
COPS3-207ENST00000477299 HDAC8Q9BY41 377 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms